CF834868

Overview
NameCF834868
Unique NameCF834868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_AQUAE (Pyrroline-5-carboxylate reductase OS=Aquifex aeolicus GN=proC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.580e-25
Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSGPA++F  I+ALA  GV  G   E AL +A  TV+G+A ++ +   +P +L   V SPGGTTI GI  LE+ GF+G +M  +   ++++++L
Sbjct:  170 LAGSGPAFVFSFIDALALAGVHQGFSYEQALRIALDTVMGSAKLLKEFQVNPNELIAKVTSPGGTTIEGIKYLEEKGFKGTVMECINRTSQKAKKL 265          

HSP 2 Score: 56.6102 bits (135), Expect = 2.580e-25
Identity = 29/89 (32.58%), Postives = 52/89 (58.43%), Query Frame = 2
Query:  152 IRPLLSRKKLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            ++ L   K +++S+ AGV ++ +++  G  +  +RVMPN   AVG     ++  G  +EE+   + +L  S G ++R +E+LFDA T L
Sbjct:   82 LQKLKDYKGIILSIMAGVSIEKMEKILGKDKKIVRVMPNVNVAVGSGVMAITDNGNLSEEERSKVEELLLSCGTLYRIEERLFDAFTAL 170          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_YEAST (Pyrroline-5-carboxylate reductase OS=Saccharomyces cerevisiae GN=PRO3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.759e-24
Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L+GSGPA++ L +E+L + G+  G+P + +   A + + G   MV KSG HP  LK  V +PGGTTIAG+  +E+ G +  ++N V  AA+ + +L
Sbjct:  186 LVGSGPAFVLLMLESLMESGLKLGIPLQESKECAMKVLEGTVKMVEKSGAHPSVLKHQVCTPGGTTIAGLCVMEEKGVKSGIINGVEEAARVASQL 281          

HSP 2 Score: 52.373 bits (124), Expect = 2.759e-24
Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 2
Query:  176 KLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            KLL+S+AAG  +  L ++T  S   RVM NTP+  G    V+S     ++E   L+ +L   VGK     EK  DA T L
Sbjct:  109 KLLISLAAGWTIDQLSQYT--STVCRVMTNTPAKYGYGCAVVSYSADVSKEQKPLVNELISQVGKYVELPEKNMDAATAL 186          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_SCHPO (Pyrroline-5-carboxylate reductase OS=Schizosaccharomyces pombe GN=pro3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.591e-24
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 3
Query:  432 GSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            GSGPA++   IEA+ DGGV  G+P   A  LA+QT++G   MV + G+HP  +++DV++P G TI+G+  LE    R  +   +  A K +  L
Sbjct:  188 GSGPAFVATMIEAMTDGGVMMGIPFPQAQELAAQTMVGTGRMVLQ-GQHPAMIRNDVSTPAGCTISGLLALEDGKIRSTIARGIEQATKTASGL 280          

HSP 2 Score: 57.7658 bits (138), Expect = 3.591e-24
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 2
Query:  176 KLLVSVAAGVKLKDLQEWTGHS-RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            KL++S+ AG  +  LQ     S R IR+MPNT S + E+ +V+  G  ATEED +    +F  +G+  +  EKL DA T +
Sbjct:  106 KLILSILAGKTISSLQSMLDESTRVIRIMPNTASRIRESMSVICPGPNATEEDIKFAEWVFNGIGRSMKLPEKLIDAATAV 186          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR2_BACSU (Pyrroline-5-carboxylate reductase 2 OS=Bacillus subtilis GN=proI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.916e-24
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            + GSGPAY++  IEA+       GL +E A  L  QT+ GA  M+ +SGK P +L+ ++ SPGGTT AG+  L+ S F   +++ +   AKRS E+
Sbjct:  170 IAGSGPAYVYRYIEAMEKAAQKVGLDKETAKALILQTMAGATDMLLQSGKQPEKLRKEITSPGGTTEAGLRALQDSRFEEAIIHCIEETAKRSAEI 265          

HSP 2 Score: 49.2914 bits (116), Expect = 7.916e-24
Identity = 29/89 (32.58%), Postives = 52/89 (58.43%), Query Frame = 2
Query:  152 IRPLLSRKKLLVSVAAGVKLKDLQEWTGHS-RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            IRP + + +L++SV AG+ ++ +Q + G     IRVMPNT +A+ ++AT  S+   A++ D      L  ++G     +E+  DA+T +
Sbjct:   83 IRPYI-KDQLVISVLAGLTIETIQHYFGRKLAVIRVMPNTSAAIRKSATGFSVSTEASKNDIIAAKALLETIGDATLVEERHLDAVTAI 170          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_CAEEL (Putative pyrroline-5-carboxylate reductase OS=Caenorhabditis elegans GN=F55G1.9 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19
Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 3
Query:  432 GSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSG-------KHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 716
            GS PA+ F+ IE+LADG VA GL R  A  LA+Q VLGAA MV  S        +H G LKD V SPGGTTI G+  LEK+GFR  +M AVVAA+ ++ E++
Sbjct:  193 GSSPAWTFMYIESLADGAVAQGLGRAEAKRLAAQAVLGAAQMVLNSNSGFDIETQHFGSLKDMVCSPGGTTIEGVRALEKNGFRYAVMEAVVAASTKADEMA 294          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_NEUCR (Pyrroline-5-carboxylate reductase OS=Neurospora crassa GN=pro-1 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 4.956e-19
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAV 683
            L  SG A+  L +EA ADGGVA GLPR  A  +A+QT+ GAA +V + G+HP  L++ V++PGG TI G+  LE+ G R  +  AV
Sbjct:  225 LCASGTAFFALMMEAAADGGVAMGLPRAEANRMAAQTMRGAAGLVLE-GEHPAILREKVSTPGGCTIGGLLVLEEGGVRAAVARAV 309          

HSP 2 Score: 38.1206 bits (87), Expect = 4.956e-19
Identity = 31/95 (32.63%), Postives = 48/95 (50.53%), Query Frame = 2
Query:  173 KKLLVSVAAGVKLKDLQ----EWTGHSR-----FIRVMPNTPSAVGEAATVMS-----LGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            +K+++S+ AGV + DL+    E  G S       +R MPNT S + E+ TV++     L  T T    EL+  +F  +G++      L DA T L
Sbjct:  135 QKIIISICAGVTVPDLERVLREDVGLSADNLPIVVRAMPNTASKIRESMTVINTVDPPLPDTVT----ELLTWIFERIGEVVYLPPHLMDACTSL 225          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_ZALAR (Pyrroline-5-carboxylate reductase OS=Zalerion arboricola GN=P5CR PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16
Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSGPA+  L +EA  DG VA GLPR  A  +A+QT+ GAA +V  SG+HP  LKD V +PGG TI G+  LE+ G RG +  AV  A   + +L
Sbjct:  214 LCGSGPAFFALILEAAIDGAVAMGLPRAEAQRMAAQTMKGAAGLVL-SGEHPALLKDKVTTPGGCTIGGLMVLEEGGVRGTVARAVREATVVASQL 308          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_HAEIN (Pyrroline-5-carboxylate reductase OS=Haemophilus influenzae GN=proC PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.210e-15
Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 3
Query:  432 GSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHP-GQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            GS PAY FL +EA+    +   +  + A  L  Q++LGAA MVT++ +     L+++V S GGTT A +   +   F   +  A+ A   RS+E+
Sbjct:  173 GSSPAYFFLMLEAMQKALIKMNIDEKTARELVQQSMLGAAKMVTENPQIALSTLRENVTSKGGTTAAALAVFDAQHFNQTIEQAMQACLSRSQEM 267          

HSP 2 Score: 45.4394 bits (106), Expect = 2.210e-15
Identity = 28/80 (35.00%), Postives = 41/80 (51.25%), Query Frame = 2
Query:  176 KLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGK-IWRADEKLFDAIT 409
            KLL+S+AAG+  + L       +  +RVMPNTP+ VGE    +      +E        L G+VG+ +W  DE    A+T
Sbjct:   90 KLLISIAAGISTERLNALIPSVKSIVRVMPNTPALVGEGMAGLFAPKNTSENYRTFAQDLLGAVGRTVWVNDETQMHAVT 169          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_MYCLE (Pyrroline-5-carboxylate reductase OS=Mycobacterium leprae GN=proC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  432 GSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTK---SGKH--------------PGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            GSGPAY FL +EAL D GVA GL R++A  LA+QT+ G+A+M+ +     +H                QL+  + SPGGTT A + ELE+ G R ++  AV AA  RS +L
Sbjct:  179 GSGPAYFFLLVEALVDAGVAVGLTRQVATELAAQTMAGSAAMLLERMDQDRHSAEVAPLGAQVDVPAAQLRATITSPGGTTAAALRELERGGLRMVVDAAVQAAKIRSEQL 289          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_VIBAL (Pyrroline-5-carboxylate reductase OS=Vibrio alginolyticus GN=proC PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 6.298e-15
Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 3
Query:  432 GSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGK-HPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            GS PAY FL +EA+    +A G  +E A  L  Q  LGAASMV  + +     L+++V S GGTT   +    +     I+  A+ AA  R+ E+
Sbjct:  180 GSAPAYFFLFMEAMQAEAIAQGFDKESARLLVQQAALGAASMVVSNPETELSTLRENVTSKGGTTAEALRTFNEHQLSDIVAKAMQAAVARAEEM 274          

HSP 2 Score: 42.3578 bits (98), Expect = 6.298e-15
Identity = 30/122 (24.59%), Postives = 49/122 (40.16%), Query Frame = 2
Query:   11 ALSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHS-RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI 373
            A S  +R    +  G++  SDN                         ++ +    KL++S+AAG+    L +        +RVMPNTPS +G   + +      TE D     +L  +VGK+
Sbjct:   42 APSEARRLPLEQDFGIRTTSDNIQAATEADVVVLSVKPQMMADVCKPLQAIDFTNKLVISIAAGINCSRLDDMLATKLNLVRVMPNTPSQLGLGMSGLFAPIHVTEHDKAFAAELMEAVGKV 163          
The following BLAST results are available for this feature:
BLAST of CF834868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
P5CR_AQUAE2.580e-2542.71Pyrroline-5-carboxylate reductase OS=Aquifex aeoli... [more]
P5CR_YEAST2.759e-2440.63Pyrroline-5-carboxylate reductase OS=Saccharomyces... [more]
P5CR_SCHPO3.591e-2440.43Pyrroline-5-carboxylate reductase OS=Schizosacchar... [more]
P5CR2_BACSU7.916e-2441.67Pyrroline-5-carboxylate reductase 2 OS=Bacillus su... [more]
P5CR_CAEEL2.020e-1953.92Putative pyrroline-5-carboxylate reductase OS=Caen... [more]
P5CR_NEUCR4.956e-1948.84Pyrroline-5-carboxylate reductase OS=Neurospora cr... [more]
P5CR_ZALAR2.731e-1650.00Pyrroline-5-carboxylate reductase OS=Zalerion arbo... [more]
P5CR_HAEIN2.210e-1534.74Pyrroline-5-carboxylate reductase OS=Haemophilus i... [more]
P5CR_MYCLE5.150e-1543.24Pyrroline-5-carboxylate reductase OS=Mycobacterium... [more]
P5CR_VIBAL6.298e-1536.84Pyrroline-5-carboxylate reductase OS=Vibrio algino... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06E05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834868 ID=CF834868; Name=CF834868; organism=Citrus sinensis; type=EST; length=779bp
CTGCACCGCCGCCCTCTCTAATCTCAAACGCCGTGATGCTTTTGAGTCCA
TCGGCGTCAAAGTATTATCCGACAATAACGCCGTTGTTGAATACAGCGAT
GTGGTTGTTTTCTCTGTGAAACCGCAAGTAGTTAAAGATGTGGCCATGCA
GATAAGGCCGCTGTTATCACGGAAGAAGCTTTTGGTTTCTGTTGCTGCAG
GAGTGAAATTGAAAGACCTTCAGGAATGGACTGGTCACAGCCGGTTTATT
AGAGTTATGCCTAATACACCTTCTGCTGTAGGTGAGGCTGCAACAGTTAT
GAGCTTGGGAGGAACTGCAACAGAAGAGGATGGGGAACTAATCGGTAAAT
TATTCGGATCAGTTGGCAAGATATGGCGAGCGGATGAGAAATTGTTTGAT
GCAATCACGGGCCTGAGGTATGTGGCTTCTTGGCAGCGGTCCAGCATATA
TATTTTTAGCAATTGAAGCTTTGGCTGATGGAGGTGTGGCTGCAGGGCTA
CCGCGAGAACTTGCACTTGGTCTAGCTTCTCAGACAGTATTAGGAGCAGC
ATCAATGGTCACTAAAAGTGGGAAGCATCCTGGTCAGCTAAAAGATGATG
TTGCATCGCCTGGTGGGACTACTATTGCTGGTATTCATGAGTTGGAGAAA
AGTGGATTTCGTGGGATATTAATGAATGCTGTTGTTGCTGCTGCTAAGCG
AAGCCGAGAACTGTCCTAGAGCTAATTCATTTTGATTCCAGTTTCTCAGC
TCTTACACTTCTAGTATGGCGATTAAACC
back to top