CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_SALHS (Chaperone protein dnaK OS=Salmonella heidelberg (strain SL476) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K I   AD     ++ KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_SALG2 (Chaperone protein dnaK OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K I   AD     ++ KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_SALEP (Chaperone protein dnaK OS=Salmonella enteritidis PT4 (strain P125109) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K I   AD     ++ KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_SALDC (Chaperone protein dnaK OS=Salmonella dublin (strain CT_02021853) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K I   AD     ++ KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_SALCH (Chaperone protein dnaK OS=Salmonella choleraesuis GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K I   AD     ++ KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_SALA4 (Chaperone protein dnaK OS=Salmonella agona (strain SL483) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K I   AD     ++ KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIG--ADNGDAWLDVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 65/147 (44.22%), Postives = 90/147 (61.22%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +    ++I N +G RTTPS + F + E+L+G +AK Q   NP NTV+  KRLIGR F+D  V+ D ++ P+  +        + V    E K+ +  +IS+ +L KM+E AE YLG  +  AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENSEGERTTPSIIAFANGEKLVGQSAKRQAVTNPRNTVYAVKRLIGRNFTDPMVKKDQEIVPYNIVKADNGDAWVEV----EGKKHSPSQISAFILQKMKETAENYLGEKVTQAVITVPAY 144
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEU5 (Chaperone protein dnaK OS=Pseudomonas stutzeri (strain A1501) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS + +T D E L+G +AK Q   NP NT++  KRLIGRRF +  VQ D+K+ P+  +   AD     V  KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSIMENGNVKVIENAEGGRTTPSIIAYTNDGETLVGQSAKRQAVTNPQNTLYAVKRLIGRRFEEDVVQKDIKMVPYTIV--KADNGDAWVEVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_MARMM (Chaperone protein dnaK OS=Maricaulis maris (strain MCS10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.056e-28
Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = 2 
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++I N +G RTTPS V FT D ERLIG  AK Q   NP  T F  KRLIGR   D +V+ D+ + P+K +   ++   +    +G +K+++  EIS+  L KM+E AE+YLG  +  AV+TVPAY
Sbjct:    5 IGIDLGTTNSCVAVMESGQPKVIENSEGVRTTPSVVAFTEDGERLIGQPAKRQAVTNPDYTFFAIKRLIGRMMDDPTVKKDIDMVPYKIVPSDSNDAWV----QGRDKKYSPSEISAFTLQKMKETAESYLGEKVEKAVITVPAY 145
[Close]
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_YERPY (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.379e-28
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2 
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D   Q D  + P+K IA  AD     +  KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIA--ADNGDAWLEVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SALHS1.056e-2847.30Chaperone protein dnaK OS=Salmonella heidelberg (s... [more]
DNAK_SALG21.056e-2847.30Chaperone protein dnaK OS=Salmonella gallinarum (s... [more]
DNAK_SALEP1.056e-2847.30Chaperone protein dnaK OS=Salmonella enteritidis P... [more]
DNAK_SALDC1.056e-2847.30Chaperone protein dnaK OS=Salmonella dublin (strai... [more]
DNAK_SALCH1.056e-2847.30Chaperone protein dnaK OS=Salmonella choleraesuis ... [more]
DNAK_SALA41.056e-2847.30Chaperone protein dnaK OS=Salmonella agona (strain... [more]
DNAK_RICBR1.056e-2844.22Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]
DNAK_PSEU51.056e-2847.30Chaperone protein dnaK OS=Pseudomonas stutzeri (st... [more]
DNAK_MARMM1.056e-2846.90Chaperone protein dnaK OS=Maricaulis maris (strain... [more]
DNAK_YERPY1.379e-2847.30Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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