CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA8 (Chaperone protein dnaK OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+  +   AD     V  KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAILENGNVKVIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIV--KADNGDAWVEVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA7 (Chaperone protein dnaK OS=Pseudomonas aeruginosa (strain PA7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+  +   AD     V  KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAILENGNVKVIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIV--KADNGDAWVEVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_NITWN (Chaperone protein dnaK OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 70/149 (46.98%), Postives = 93/149 (62.42%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFK-GIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V F+D  ERL+G  AK Q   NP  T+F  KRLIGRR+ D +V+ D +L P+K   AG  D  +     + + K ++  +IS+  L KM+E AEA+LG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKTPKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDPTVEKDKQLVPYKIAKAGNGDAWV-----EADGKTYSPSQISAFTLQKMKETAEAHLGQKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_DESVV (Chaperone protein dnaK OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 70/147 (47.62%), Postives = 90/147 (61.22%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +    + I N +G RTTPS V FTD ERL+GD AK Q   NP  TVF  KRL+GRR     V    +  P++ +AG      + V    + + ++A EIS+M+L K++  AEAYLG T+  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVYVMEGKDPKCITNPEGGRTTPSVVAFTDKERLVGDIAKRQAVTNPERTVFAVKRLMGRRGDAPEVGRWKEHSPYRIVAGANGDAAVEV----QGRPYSAPEISAMILGKLKADAEAYLGETVTEAVITVPAY 144          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_DESVH (Chaperone protein dnaK OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 70/147 (47.62%), Postives = 90/147 (61.22%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +    + I N +G RTTPS V FTD ERL+GD AK Q   NP  TVF  KRL+GRR     V    +  P++ +AG      + V    + + ++A EIS+M+L K++  AEAYLG T+  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVYVMEGKDPKCITNPEGGRTTPSVVAFTDKERLVGDIAKRQAVTNPERTVFAVKRLMGRRGDAPEVGRWKEHSPYRIVAGANGDAAVEV----QGRPYSAPEISAMILGKLKADAEAYLGETVTEAVITVPAY 144          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPD (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V Q  +  +I N +GNRTTPS V FT + +RL+G AAK Q   NP NT++  KR +GR+F +  V  + KL P+  I     +  + +N    +K ++ +EIS+M+L KM++ AE +LG  ++ AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAFTKSGDRLVGQAAKRQAITNPKNTIYSIKRFVGRKFDE--VPNEKKLAPY-DIVNEGGEARVKIN----DKAYSPQEISAMILQKMKQTAEDFLGEKVSEAVITVPAY 142          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAT (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +   ++ +++ N +G+RTTPS + +T + E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+  +        I V    ++++ A  +IS+ VL KM++ AE YLG TI  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGNKPRVLENAEGDRTTPSIIAYTQEGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAI (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +   ++ +++ N +G+RTTPS + +T + E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+  +        I V    ++++ A  +IS+ VL KM++ AE YLG TI  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGNKPRVLENAEGDRTTPSIIAYTQEGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BUCA5 (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +   ++ +++ N +G+RTTPS + +T + E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+  +        I V    ++++ A  +IS+ VL KM++ AE YLG TI  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGNKPRVLENAEGDRTTPSIIAYTQEGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + +    +++ N++G RTTPS V +T D +RL+G  AK Q   NP NT++ AKR IGRRF +  +Q ++KL P+  +A   D       +K + K  + EEI + VL K++++AE YLG  +  AVVTVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGGEPKVLVNEEGARTTPSVVAYTKDGDRLVGQIAKRQAVTNPENTIYSAKRFIGRRFEE--IQEEIKLVPYTVVAKGND-----CAFKVQGKTASPEEIGAAVLAKLKKVAEDYLGEPVTEAVVTVPAY 142          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PSEA86.843e-2846.62Chaperone protein dnaK OS=Pseudomonas aeruginosa (... [more]
DNAK_PSEA76.843e-2846.62Chaperone protein dnaK OS=Pseudomonas aeruginosa (... [more]
DNAK_NITWN6.843e-2846.98Chaperone protein dnaK OS=Nitrobacter winogradskyi... [more]
DNAK_DESVV6.843e-2847.62Chaperone protein dnaK OS=Desulfovibrio vulgaris s... [more]
DNAK_DESVH6.843e-2847.62Chaperone protein dnaK OS=Desulfovibrio vulgaris (... [more]
DNAK_CHLPD6.843e-2845.27Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]
DNAK_BUCAT6.843e-2845.27Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCAI6.843e-2845.27Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCA56.843e-2845.27Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BDEBA6.843e-2845.27Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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