CF834932

Overview
NameCF834932
Unique NameCF834932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 42/135 (31.11%), Postives = 68/135 (50.37%), Query Frame = -3
Query:  329 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILMSVNANGKERTESEWAKLFSDAGFSHYKIT-PIFGMRSLIEVY 730
            DLP V+ N P    ++++ GDMF  +P  DA + K V H   DE  ++ L    +A++ N   GKVII++ ++                D LM +   G+ERTE ++ KL   +GFS +++    F    ++E Y
Sbjct:  240 DLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPN---GKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFY 371          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14
Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P    ++++ GDMF  IP ADA   K + H   DE  LK LK   EA+  N   GKVI+ + ++                D++M + N  GKERT+ E+  L   AGF  +K+
Sbjct:  231 DLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDN---GKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKV 349          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = -3
Query:  335 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFD-ILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIE 730
            DLPHV++  P    ++++ GDMF+ +P  DA L K + H   D     +LK   +A+  N   GKVII++ V+             F  D I+++ N  G+ER E E+  L   AGFS +K T I+     IE
Sbjct:  230 DLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPEN---GKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIE 359          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = -3
Query:  359 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDIL-MSVNANGKERTESEWAKLFSDAGFSHYKITPI 730
            +LPHV+ + P+   ++++ GDMF+ +P A   L K V H  DD+  +KILK   +A+  N   G VI+I+ V+                D+L M++N  GKERT  E+  L   AGF+  K  PI
Sbjct:  246 ELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPEN---GTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPI 367          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = -3
Query:  380 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILMSV-NANGKERTESEWAKLFSDAGFS 730
            DLPHV+A+ P    ++++ G+MF+ IP ADA   K V H   DE  +KIL K  E++A   +GGK+I+++ +I             F  D    V N  GKER++ ++  L S  GFS
Sbjct:  232 DLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLA---KGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFS 346          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDIL-MSVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + PE   ++++ GDMF  +P  DA   K + H   DE  LK+LK   +A+ +N   GKVI+ + ++                D++ ++ N  GKERTE E+  L   AGF  +++
Sbjct:  207 DLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNN---GKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQV 325          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDIL-MSVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + PE   ++++ GDMF  +P  DA   K + H   DE  LK+LK   +A+ +N   GKVI+ + ++                D++ ++ N  GKERTE E+  L   AGF  +++
Sbjct:  207 DLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNN---GKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQV 325          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFD-ILMSVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+A+ P    ++ + GDMF  +P ADA   K + H   DE  L++LK   +A+  N   GKVI+++ ++                D I+++ N  GKERT+ E+  L   AGF  +++
Sbjct:  230 DLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPEN---GKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEV 348          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P    ++++ GDMF  +P ADA   K + H   D   LK LK   +A+  N   GKVI+++ ++                D++M + N  GKERTE E+  L   AGF  +++
Sbjct:  231 DLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPEN---GKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEV 349          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P    ++++ GDMF  +P ADA   K + H   D   LK LK   +A+  N   GKVI+++ ++                D++M + N  GKERTE E+  L + AGF  +++
Sbjct:  231 DLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPEN---GKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEV 349          
The following BLAST results are available for this feature:
BLAST of CF834932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
CHOMT_MEDSA6.690e-1431.11Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
COMT1_MEDSA8.737e-1436.07Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_SACOF1.141e-1334.59Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
SMT_COPJA1.490e-1336.00(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
IMT1_MESCR1.947e-1337.29Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
OMT2_CHRAE4.336e-1333.61Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE4.336e-1333.61Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT3_POPKI1.262e-1233.61Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_POPTM1.262e-1233.61Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_POPKI1.262e-1233.61Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834932 ID=CF834932; Name=CF834932; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTAAGCACGATCGTAACTTTATTAGTAAAGATAAAACATAAGAGCA
GATGCTGGAAACAATAACAAAATGCAATATAACATAGTACACACAAATCC
TTTATTCTTAATATATTAAAGGGTGGTCTAGGATATTTAAGTTTCCATCC
CAAAAGACTATAGCATTTTAATTGAGTGACTCATCCTATATTTAAACCCG
TGTGTCACCTCATTTTCTAGTCATTTCGAGACATTTCAACTACTACGCAT
ACATCTTGAACGAAACTTTGCTATTCCATCAAGCAGTACAAGAGACTTGC
GGGAATACTGTTACTCAATTCTTTATGGATAGACTTCAATGAGGGATCTC
ATGCCAAATATAGGTGTTATTTTGTAGTGACTGAACCCAGCGTCGGAGAA
TAGCTTTGCCCATTCACTTTCAGTTCTCTCTTTTCCATTAGCGTTAACGC
TCATCAAAATGTCAAACAAGAACTTTGTTTCGGTTAATTCATGTTCCTCT
TCCTCTGCATTGATAACAATATCTATTATTATGACCTTTCCTCCCTCACC
ATTGCTTGCAATTGCTTCTCTGCGTTTCTTCAGTATCTTCAACCCATCCT
CATCATCTAATCCATGAAAAACCAACTTGAAGAGAAAGGCATCTGCAGGA
GGGATAAACTGAAACATGTCACCTGCTATGTATTTCAAGTTGTCGGCCTC
AGGCAGGTTAGCAACAACATGCGGGAGGTCGA
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