CF834944

Overview
NameCF834944
Unique NameCF834944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: TDX_CYNPY (Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.689e-27
Identity = 56/105 (53.33%), Postives = 79/105 (75.24%), Query Frame = -1
Query:  220 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFA 534
            K GGLG +K PL+ D  ++IS+ YG+L  D+GI+ RGLFIID +G+++Q ++N+L +GRSV+ETLR +QA Q   +   EVCP+GWKPG  ++KPD   SKEYF+
Sbjct:   93 KEGGLGSMKIPLVADTKRTISQDYGVLKEDEGISFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQHT-DKFGEVCPAGWKPGSDTIKPDISKSKEYFS 196          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX3_PONAB (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Pongo abelii GN=PRDX3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.882e-27
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = -1
Query:  214 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFAAI 534
            K+GGLG +   L+ D+TK IS+ YG+L+   G+ALRGLFIID  GVI+  SVN+L +GRSVEETLR ++A Q+V E   EVCP+ W P   ++KP+P  SKEYF  +
Sbjct:  149 KNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYV-ETHGEVCPANWTPDSPTIKPNPAASKEYFQKV 254          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX1_GECJA (Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.882e-27
Identity = 56/105 (53.33%), Postives = 79/105 (75.24%), Query Frame = -1
Query:  220 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFA 534
            K GGLG +  PL+ D  + I+K YGIL  D+GI+ RGLFIID +G ++Q ++N+L +GRSV+ETLR +QA QF  ++  EVCP+GW+PG  ++KPD + SKEYF+
Sbjct:   93 KQGGLGSMHIPLVSDTKRVIAKDYGILKEDEGISYRGLFIIDDKGTLRQITINDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWQPGSDTIKPDVQKSKEYFS 196          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX_ASCSU (Peroxiredoxin OS=Ascaris suum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.763e-27
Identity = 58/104 (55.77%), Postives = 76/104 (73.08%), Query Frame = -1
Query:  223 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYF 534
            K GGLG++K P+I D    IS+ YG+L  D GIA RGLFIID +G+++Q +VN+L +GRSV ETLR +QA QFV ++  EVCP+GW PG  ++KP  K SK YF
Sbjct:   90 KQGGLGEMKIPIISDNNHQISRDYGVLKEDDGIAYRGLFIIDPKGILRQITVNDLPVGRSVTETLRLVQAFQFVDKH-GEVCPAGWTPGADTIKPGVKESKAYF 192          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX3_HUMAN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Homo sapiens GN=PRDX3 PE=1 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 3.763e-27
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = -1
Query:  214 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFAAI 534
            K+GGLG +   L+ D+TK IS+ YG+L+   G+ALRGLFIID  GVI+  SVN+L +GRSVEETLR ++A Q+V E   EVCP+ W P   ++KP P  SKEYF  +
Sbjct:  149 KNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYV-ETHGEVCPANWTPDSPTIKPSPAASKEYFQKV 254          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX2_BOVIN (Peroxiredoxin-2 OS=Bos taurus GN=PRDX2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.915e-27
Identity = 55/105 (52.38%), Postives = 78/105 (74.29%), Query Frame = -1
Query:  220 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFA 534
            K GGLG L  PL+ D+T+ +S  YG+L  D+GIA RGLF+ID +GV++Q ++N+L +GRSV+E LR +QA Q+  E+  EVCP+GW PG  ++KP+   SKEYF+
Sbjct:   93 KEGGLGPLNIPLLADVTRKLSSDYGVLKEDEGIAYRGLFVIDGKGVLRQVTINDLPVGRSVDEALRLVQAFQYTDEH-GEVCPAGWTPGSDTIKPNVDDSKEYFS 196          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX3_RAT (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus GN=Prdx3 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 6.419e-27
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = -1
Query:  214 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFAAI 534
            K+GGLG +   L+ D+TK IS+ YG+L+   GIALRGLFIID  GVI+  SVN+L +GRSVEE LR ++A QFV E   EVCP+ W P   ++KP P  SKEYF  +
Sbjct:  150 KNGGLGHMNITLLSDLTKQISRDYGVLLESAGIALRGLFIIDPNGVIKHLSVNDLPVGRSVEEPLRLVKAFQFV-ETHGEVCPANWTPESPTIKPSPTASKEYFEKV 255          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX1_CRIGR (Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.419e-27
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1
Query:  220 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFA 534
            K GGLG +  PL+ D  ++I++ YG+L  D+GI+ RGLFIID +G+++Q ++N+L +GRSV+E LR +QA QF  ++  EVCP+GWKPG  ++KPD + SKEYF+
Sbjct:   93 KQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX1_RAT (Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.384e-27
Identity = 54/105 (51.43%), Postives = 79/105 (75.24%), Query Frame = -1
Query:  220 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFA 534
            K GGLG +  PL+ D  ++I++ YG+L  D+GI+ RGLFIID +G+++Q ++N+L +GRSV+E LR +QA QF  ++  EVCP+GWKPG  ++KPD   SKEYF+
Sbjct:   93 KQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVNKSKEYFS 196          
BLAST of CF834944 vs. ExPASy Swiss-Prot
Match: PRDX3_BOVIN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Bos taurus GN=PRDX3 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.095e-26
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = -1
Query:  214 KSGGLGDLKYPLIGDITKSISKSYGILIRDQGIALRGLFIIDKEGVIQQSSVNNLAIGRSVEETLRTLQALQFVQENPDEVCPSGWKPGVKSMKPDPKLSKEYFAAI 534
            K+GGLG +   L+ D+TK IS+ YG+L+   G+ALRGLFIID  GVI+  SVN+L +GRSVEETLR ++A QFV+ +  EVCP+ W P   ++KP P  S+EYF  +
Sbjct:  150 KNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAH-GEVCPANWTPESPTIKPHPTASREYFEKV 255          
The following BLAST results are available for this feature:
BLAST of CF834944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
TDX_CYNPY1.689e-2753.33Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1[more]
PRDX3_PONAB2.882e-2754.21Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX1_GECJA2.882e-2753.33Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 S... [more]
PRDX_ASCSU3.763e-2755.77Peroxiredoxin OS=Ascaris suum PE=2 SV=1[more]
PRDX3_HUMAN3.763e-2754.21Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX2_BOVIN4.915e-2752.38Peroxiredoxin-2 OS=Bos taurus GN=PRDX2 PE=2 SV=1[more]
PRDX3_RAT6.419e-2755.14Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX1_CRIGR6.419e-2751.43Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=... [more]
PRDX1_RAT8.384e-2751.43Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1... [more]
PRDX3_BOVIN1.095e-2653.27Thioredoxin-dependent peroxide reductase, mitochon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834944 ID=CF834944; Name=CF834944; organism=Citrus sinensis; type=EST; length=534bp
AGAGGCCCTTTAAAAGAGATTTTGTTGTGCCTGCATTACAAAGGAACCCT
TAAGGGGGACAAATCCAGTCCAATGCATTTATTCCCCACAGGCATGCTCC
GCAAAACTCAACAGATAAGTAGCAAAATCACATTACATGGAAAAACAAAA
CTCATCTACCCCTCCCTAATAGACATAGATATGCATACCAGGTTCCAATG
CTAACCCCTCTTATATAGCTGCAAAGTACTCCTTGCTGAGTTTTGGGTCT
GGCTTCATGGATTTGACCCCGGGCTTCCATCCTGATGGGCAAACTTCATC
TGGGTTCTCCTGCACAAACTGCAAGGCCTGAAGTGTTCTCAGTGTCTCTT
CAACACTCCTACCAATGGCAAGGTTGTTAACGGATGACTGCTGGATGACT
CCTTCTTTGTCAATAATAAAGAGTCCTCTCAATGCAATTCCCTGATCACG
GATCAGAATACCATAGGATTTTGAAATTGATTTGGTGATATCACCAATTA
GGGGGTACTTCAAATCACCAAGACCACCTGACTT
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