CF834945

Overview
NameCF834945
Unique NameCF834945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11471 contig Csv1_Contig11471:353..1125. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX2_MOUSE (Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3)

HSP 1 Score: 227.639 bits (579), Expect = 5.730e-59
Identity = 113/184 (61.41%), Postives = 138/184 (75.00%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF A AV D  F  +KLSDY GK YV+LFFYPLDFTFVCPTEI AF D   +F KL  E+LGVS DS F+HLAW+ T RK GGLG L  PL+AD+TKS+S++YG+L  D+GIA RGLFIID +GV++  T+ +L +GRSVD  LR +QA QY  E+  EVCPAGWKPG  ++KP+   SKEYF+
Sbjct:   14 DFTATAVVDGAFKEIKLSDYRGK-YVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEGIAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEH-GEVCPAGWKPGSDTIKPNVDDSKEYFS 195          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX2_RAT (Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 1.667e-58
Identity = 112/184 (60.87%), Postives = 137/184 (74.46%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF   AV D  F  +KLSDY GK YV+LFFYPLDFTFVCPTEI AF D   +F KL  E+LGVS DS F+HLAW+ T RK GGLG L  PL+AD+TKS+S++YG+L  D+GIA RGLFIID +GV++  T+ +L +GRSVD  LR +QA QY  E+  EVCPAGWKPG  ++KP+   SKEYF+
Sbjct:   14 DFTGTAVVDGAFKEIKLSDYRGK-YVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEGIAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEH-GEVCPAGWKPGSDTIKPNVDDSKEYFS 195          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX2_CRIGR (Peroxiredoxin-2 OS=Cricetulus griseus GN=PRDX2 PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.714e-58
Identity = 111/184 (60.33%), Postives = 138/184 (75.00%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF A AV D  F  VKLSDY GK YV+LFFYPLDFTFVCPTEI AF +   +F KL  E+LGVS DS F+HLAW+ T RK GGLG L  PL+AD+T+S+S++YG+L  D+GIA RGLFIID +G+++  T+ +L +GRSVD  LR +QA QY  E+  EVCPAGWKPG  ++KP+   SKEYF+
Sbjct:   14 DFTATAVVDGAFKEVKLSDYRGK-YVVLFFYPLDFTFVCPTEIIAFSNHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRSLSENYGVLKTDEGIAYRGLFIIDAKGILRQITVNDLPVGRSVDEALRLVQAFQYTDEH-GEVCPAGWKPGSDTIKPNVDDSKEYFS 195          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX2_MACFA (Peroxiredoxin-2 OS=Macaca fascicularis GN=PRDX2 PE=2 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 6.335e-58
Identity = 112/184 (60.87%), Postives = 137/184 (74.46%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF A AV D  F  VKLSDY GK YV+LFFYPLDFTFVCPTEI AF +R  +F KL  E+LGVS DS F+HLAW+ T RK GGLG L  PL+AD+T+ +S+ YG+L  D+GIA RGLFIID +GV++  T+ +L +GRSVD  LR +QA QY  E+  EVCPAGWKPG  ++KP+   SKEYF+
Sbjct:   14 DFKATAVVDGAFKEVKLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEH-GEVCPAGWKPGSDTIKPNVDDSKEYFS 195          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX2_HUMAN (Peroxiredoxin-2 OS=Homo sapiens GN=PRDX2 PE=1 SV=5)

HSP 1 Score: 224.172 bits (570), Expect = 6.335e-58
Identity = 112/184 (60.87%), Postives = 137/184 (74.46%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF A AV D  F  VKLSDY GK YV+LFFYPLDFTFVCPTEI AF +R  +F KL  E+LGVS DS F+HLAW+ T RK GGLG L  PL+AD+T+ +S+ YG+L  D+GIA RGLFIID +GV++  T+ +L +GRSVD  LR +QA QY  E+  EVCPAGWKPG  ++KP+   SKEYF+
Sbjct:   14 DFKATAVVDGAFKEVKLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEH-GEVCPAGWKPGSDTIKPNVDDSKEYFS 195          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_CHICK (Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.195e-56
Identity = 108/185 (58.38%), Postives = 140/185 (75.68%), Query Frame = 2
Query:    2 DFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF A AV  D +F ++KLSDY GK YV+ FFYPLDFTFVCPTEI A+ DR  EF+K+N EI+G S DS F HLAW+ T +K GGLG +K PL++D  + I+K YG+L  D+GIA RGLFIID++G+++  TI +L +GRSVD TLR +QA Q+  ++  EVCPAGWKPG  ++KPD + SKEYF+
Sbjct:   14 DFTATAVMPDGQFKDIKLSDYRGK-YVVFFFYPLDFTFVCPTEIIAYSDRADEFKKINCEIIGASVDSHFCHLAWINTPKKQGGLGTMKIPLVSDTKRVIAKDYGVLKEDEGIAYRGLFIIDEKGILRQITINDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_GECJA (Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.943e-55
Identity = 107/185 (57.84%), Postives = 136/185 (73.51%), Query Frame = 2
Query:    2 DFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF A AV  D +F  +KLSDY GK YV+LFFYPLDFTFVCPTEI AF DR  EF K+N E++G S DS F HLAW+ T +K GGLG +  PL++D  + I+K YGIL  D+GI+ RGLFIID +G ++  TI +L +GRSVD TLR +QA Q+  ++  EVCPAGW+PG  ++KPD + SKEYF+
Sbjct:   14 DFQATAVMPDGQFKEIKLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSDRSEEFRKINCEVIGASVDSHFCHLAWINTPKKQGGLGSMHIPLVSDTKRVIAKDYGILKEDEGISYRGLFIIDDKGTLRQITINDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWQPGSDTIKPDVQKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDX_CYNPY (Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.908e-54
Identity = 106/185 (57.30%), Postives = 135/185 (72.97%), Query Frame = 2
Query:    2 DFAAEAVFDQ-EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            +F A+AV    EF ++KL+DY GK YV+ FFYPLDFTFVCPTEI AF DR  EF K+N E++  S DS F HLAW  T RK GGLG +K PL+AD  ++IS+ YG+L  D+GI+ RGLFIID +G+++  TI +L +GRSVD TLR +QA Q+  +   EVCPAGWKPG  ++KPD   SKEYF+
Sbjct:   14 EFQAKAVMPGGEFKDIKLADYRGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFRKINCELIAASVDSHFCHLAWTNTSRKEGGLGSMKIPLVADTKRTISQDYGVLKEDEGISFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQHT-DKFGEVCPAGWKPGSDTIKPDISKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX_ASCSU (Peroxiredoxin OS=Ascaris suum PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.491e-54
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYF 550
            +F A AV D +F ++ LSDY GK YV+LFFYP+DFTFVCPTEI AF +   EF+KL  E+L  STDS FSHLAW+ T RK GGLG++K P+I+D    IS+ YG+L  D GIA RGLFIID +G+++  T+ +L +GRSV  TLR +QA Q+V ++  EVCPAGW PG  ++KP  K SK YF
Sbjct:   12 EFTATAVVDGDFKSISLSDYKGK-YVVLFFYPMDFTFVCPTEIIAFSEHVGEFKKLGVEVLAASTDSQFSHLAWINTPRKQGGLGEMKIPIISDNNHQISRDYGVLKEDDGIAYRGLFIIDPKGILRQITVNDLPVGRSVTETLRLVQAFQFVDKH-GEVCPAGWTPGADTIKPGVKESKAYF 192          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_HUMAN (Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.254e-54
Identity = 103/185 (55.68%), Postives = 138/185 (74.59%), Query Frame = 2
Query:    2 DFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            +F A AV  D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AF DR  EF+KLN +++G S DS F HLAWV T +K GGLG +  PL++D  ++I++ YG+L  D+GI+ RGLFIID +G+++  T+ +L +GRSVD TLR +QA Q+  ++  EVCPAGWKPG  ++KPD + SKEYF+
Sbjct:   14 NFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196          
The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
PRDX2_MOUSE5.730e-5961.41Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3[more]
PRDX2_RAT1.667e-5860.87Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1... [more]
PRDX2_CRIGR3.714e-5860.33Peroxiredoxin-2 OS=Cricetulus griseus GN=PRDX2 PE=... [more]
PRDX2_MACFA6.335e-5860.87Peroxiredoxin-2 OS=Macaca fascicularis GN=PRDX2 PE... [more]
PRDX2_HUMAN6.335e-5860.87Peroxiredoxin-2 OS=Homo sapiens GN=PRDX2 PE=1 SV=5[more]
PRDX1_CHICK1.195e-5658.38Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=... [more]
PRDX1_GECJA2.943e-5557.84Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 S... [more]
TDX_CYNPY1.908e-5457.30Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1[more]
PRDX_ASCSU2.491e-5456.83Peroxiredoxin OS=Ascaris suum PE=2 SV=1[more]
PRDX1_HUMAN3.254e-5455.68Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bp
TGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGC
TTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTG
GACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCTGTGACCGATA
TGCTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCTCAACTGACA
GTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAGTCAGGTGGT
CTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAAATCAATTTC
AAAATCCTATGGTATTCTGATCCCTGATCAGGGAATTGCATTGAGAGGAC
TCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACCATTATCAAC
CTTGCCATTGGTAGGAGTGTTGACTAGACACTGAGAACACTTCAGGCCTT
GCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGC
CCGGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTT
GCAGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGT
CTATTAGGGAGGTGTAGATGAGTTTTGTTTTTCCATGTAATGTGATTTTG
CTACTTACTGTTGAGTTTTGCGGAGCAGCCTGTGGGGAATAAATGCATTG
GACTGGATTTGTCCACCTCTTTACTTCCTTTGTAATGCAGACACAACAAA
ATCTCTTGGTATTGTCCTCTTCA
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