CF834945

Overview
NameCF834945
Unique NameCF834945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_AERPE (Probable peroxiredoxin OS=Aeropyrum pernix GN=APE_2278 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 55/154 (35.71%), Postives = 94/154 (61.04%), Query Frame = 2
Query:   44 VKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGW 496
            +KL D Y+ + K+ +LF +P DFT VC TE  +F  RY +F++L  +++G+S DSVFSH+ W +   +  G+  + +P+IAD   ++++  G+L  +     +RG+FI+D  GVI+      + +GR VD  LR ++AL+ + ++     PA W
Sbjct:   24 IKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 175          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_NANEQ (Probable peroxiredoxin OS=Nanoarchaeum equitans GN=NEQ191 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.015e-20
Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523
            ++L D+   K+ +LF +P DFT VC TE   F   Y +F+ +NTE++G+S D VFSH+ W++  ++   + ++ +P+IAD    +++  G++ P +G   +R +FI+D EG I+         GR++   LR ++ALQ   +      PA W       KP
Sbjct:   20 MRLPDHYRGKWFVLFSHPADFTPVCTTEFVEFARNYDKFKAMNTELIGLSIDQVFSHIKWIEWIKEKFNV-EIPFPVIADDQGELARMLGMISPYKGTNTVRAVFIVDPEGYIRAMLYYPQETGRNIPEILRLVEALQ-TADKYGVATPANWHVDRYEFKP 178          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_METM5 (Probable peroxiredoxin OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0413 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.015e-20
Identity = 53/147 (36.05%), Postives = 86/147 (58.50%), Query Frame = 2
Query:   71 KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQG-IALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            K+ +LF +P DFT VC TE  AF  RY +F  LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P +G   +R +F++D  G I+        +GR++D  +R ++ALQ   +      PA W   D
Sbjct:   31 KWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRSLNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADDRGELAVKLGMISPYKGNNTVRAVFVVDATGTIRAIIYYPQEVGRNMDEVVRLVKALQTADKG--YATPANWPEND 174          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_METMP (Probable peroxiredoxin OS=Methanococcus maripaludis GN=MMP1174 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.243e-20
Identity = 53/147 (36.05%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   71 KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQG-IALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            K+ +LF +P DFT VC TE  AF  RY +F +LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P +G   +R +F++D  G I+        +GR++D  +R ++ALQ   +      PA W   D
Sbjct:   31 KWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRELNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADDRGELAVKLGMISPYKGNNTVRAVFVVDATGTIRAIIYYPQEVGRNMDEIVRLVKALQTADKG--YATPANWPNND 174          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH1_THEAC (Probable peroxiredoxin 1 OS=Thermoplasma acidophilum GN=Ta0473 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19
Identity = 56/173 (32.37%), Postives = 97/173 (56.07%), Query Frame = 2
Query:   41 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA-LRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWK----PGDKSMKPDPKLSKE 544
            ++KL D    ++ +LF +P DFT VC TE  +F  R+ +F+K+NT+++G+S DS  SH+ WV   R +  + ++ +P+I D    ++   G++  +   + +R +FI+D    ++      L IGR+VD  LR ++ALQ + +      PA W      G+K + P PK  K+
Sbjct:   25 SMKLPDQYKGRWFMLFSHPGDFTPVCTTEFYSFARRFEDFQKINTDLIGLSVDSTISHIEWVNWIRDNLKI-EVPFPIIGDSMGRVATRLGMIQAESSTSTVRAVFIVDPNSTVRLIMYYPLEIGRNVDELLRAIKALQ-MSDKYRGAMPANWPYNELIGEKMLNPAPKNVKD 195          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH1_PICTO (Probable peroxiredoxin 1 OS=Picrophilus torridus GN=PTO0377 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19
Identity = 56/168 (33.33%), Postives = 92/168 (54.76%), Query Frame = 2
Query:   41 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKP----GDKSMKPDP 529
            N+KL D    K+ +LF +P DFT VC TE  +F   + +F+KLNTE++G+S DS  SH+ W+   +++  + D+K+P+IAD    ++   G++        +R +FI+D    I+      +  GR++   LR +++LQ V +    V PA W      GD  + P P
Sbjct:   23 NIKLPDDFKGKWFVLFSHPGDFTPVCTTEFFSFAKHHDDFKKLNTELIGLSVDSKISHIEWINWIKQNLKI-DIKFPIIADPMGHVATKLGMIQAQSATQTVRAVFIVDDRSTIRAILYYPMETGRNISEILRLIKSLQMV-DKYKIVTPANWPNNEIIGDNVLNPPP 188          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_PYRAB (Probable peroxiredoxin OS=Pyrococcus abyssi GN=PYRAB10420 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.888e-19
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 2
Query:   44 VKLSDYIGK--KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKP----GDKSMKPDPKLSKE 544
            +KL D+  K  K+ ILF +P DFT VC TE      R  EF KL  E +G+S D VF+H+ W++  +++ G+ ++++P+IAD    +++  G++     I  R +FI+D +G+I+        +GR  D  LR ++AL+   EN     P  W      GDK + P     +E
Sbjct:   20 IKLPDHFTKQGKWFILFSHPADFTPVCTTEFYGMQKRLEEFRKLGVEPIGLSVDQVFAHIKWMEWIKENLGV-EIEFPIIADDRGELAEKLGMIPSGATITARAVFIVDDKGIIRAIVYYPAEVGRDWDEILRLVKALKISTEN-GVALPHKWPNNELIGDKVIIPPASTVEE 190          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: REHYA_ORYSJ (1-Cys peroxiredoxin A OS=Oryza sativa subsp. japonica GN=Os07g0638300 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.291e-18
Identity = 51/166 (30.72%), Postives = 88/166 (53.01%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523
            +++ D++G  YVILF +P DFT VC TE+ A      EF+K   ++LG+S D V SH  W++          + YP++AD ++   K   ++ PD+       +  R L I+  +  ++ S +    +GR++D  +R + ALQ   ++     P  WKPG++ + P
Sbjct:   22 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPACVGRNMDEVVRAVDALQTAAKHA-VATPVNWKPGERVVIP 186          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: REHY_HORVU (1-Cys peroxiredoxin PER1 OS=Hordeum vulgare GN=PER1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18
Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQ-----GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            +++ DY+G  YVILF +P DFT VC TE+ A  +   EFEK   ++LG+S D V SH  W +          + YP++AD  +S  K   ++ PD+      +  R L I+  + V++ S +     GR++D  +R + +L    ++     PA WKPG+
Sbjct:   22 IRIHDYVGNGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAQGQLPSRTLHIVGPDKVVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKH-KVATPANWKPGE 180          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: REHYA_ORYSI (1-Cys peroxiredoxin A OS=Oryza sativa subsp. indica GN=OsI_27030 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18
Identity = 50/166 (30.12%), Postives = 88/166 (53.01%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523
            +++ D++G  Y+ILF +P DFT VC TE+ A      EF+K   ++LG+S D V SH  W++          + YP++AD ++   K   ++ PD+       +  R L I+  +  ++ S +    +GR++D  +R + ALQ   ++     P  WKPG++ + P
Sbjct:   22 IRIHDFVGDTYIILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPSCVGRNMDEVVRAVDALQTAAKHA-VATPVNWKPGERVVIP 186          
The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TDXH_AERPE3.074e-2035.71Probable peroxiredoxin OS=Aeropyrum pernix GN=APE_... [more]
TDXH_NANEQ4.015e-2032.92Probable peroxiredoxin OS=Nanoarchaeum equitans GN... [more]
TDXH_METM54.015e-2036.05Probable peroxiredoxin OS=Methanococcus maripaludi... [more]
TDXH_METMP5.243e-2036.05Probable peroxiredoxin OS=Methanococcus maripaludi... [more]
TDXH1_THEAC1.168e-1932.37Probable peroxiredoxin 1 OS=Thermoplasma acidophil... [more]
TDXH1_PICTO1.168e-1933.33Probable peroxiredoxin 1 OS=Picrophilus torridus G... [more]
TDXH_PYRAB9.888e-1933.53Probable peroxiredoxin OS=Pyrococcus abyssi GN=PYR... [more]
REHYA_ORYSJ1.291e-1830.721-Cys peroxiredoxin A OS=Oryza sativa subsp. japon... [more]
REHY_HORVU1.687e-1833.131-Cys peroxiredoxin PER1 OS=Hordeum vulgare GN=PER... [more]
REHYA_ORYSI2.203e-1830.121-Cys peroxiredoxin A OS=Oryza sativa subsp. indic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bp
TGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGC
TTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTG
GACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCTGTGACCGATA
TGCTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCTCAACTGACA
GTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAGTCAGGTGGT
CTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAAATCAATTTC
AAAATCCTATGGTATTCTGATCCCTGATCAGGGAATTGCATTGAGAGGAC
TCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACCATTATCAAC
CTTGCCATTGGTAGGAGTGTTGACTAGACACTGAGAACACTTCAGGCCTT
GCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGC
CCGGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTT
GCAGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGT
CTATTAGGGAGGTGTAGATGAGTTTTGTTTTTCCATGTAATGTGATTTTG
CTACTTACTGTTGAGTTTTGCGGAGCAGCCTGTGGGGAATAAATGCATTG
GACTGGATTTGTCCACCTCTTTACTTCCTTTGTAATGCAGACACAACAAA
ATCTCTTGGTATTGTCCTCTTCA
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