CF834945

Overview
NameCF834945
Unique NameCF834945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_METTM (Probable peroxiredoxin OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.999e-16
Identity = 47/152 (30.92%), Postives = 88/152 (57.89%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGW 496
            +KL      ++ ILF +P DFT VC TE  AF + Y E  +L+ E++G+S D VFSH+ W++   ++    ++++P+IAD T  ++ + G++ P +    +R +F++D EG+I+        +GR++   +R ++A + + +      PA W
Sbjct:   20 MKLPAEFKGRWFILFSHPADFTPVCTTEFVAFQEVYPELRELDCELVGLSVDQVFSHIKWIEWIEENLDT-EIEFPVIAD-TGRVADTLGLIHPARPTNTVRAVFVVDPEGIIRAILYYPQELGRNIPEIVRMIRAFRVI-DAEGVAAPANW 168          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_CHLTE (Probable peroxiredoxin OS=Chlorobium tepidum GN=CT1747 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.999e-16
Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 2
Query:   74 YVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGW 496
            + +LF +P DFT VC TE  AF  R   FEK+  +++G+S D VFSH+ WV+  +++  + D+ +P++A     I+   G+L P +G   +R +F+ D  G ++        IGR++D  LR ++ LQ + ++     PA W
Sbjct:   30 WFVLFSHPADFTPVCTTEFVAFQQRVEAFEKIGCKLIGMSVDQVFSHIKWVEWIKENLDV-DITFPIVA-ANDRIANKLGMLHPGKGTNTVRAVFVGDPNGKVRLVLYYPQEIGRNMDEILRAVKVLQ-ISDSNKVAMPADW 168          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: REHY_MEDTR (1-Cys peroxiredoxin OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.888e-15
Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQ-----GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            +KL  +    + ILF +P DFT VC TE+       +EF K    +LG+S D + SH  W++          + YP+I+D  + I K   ++ PD+      +  R L I+  +  I+ S +     GR++D  LR +++LQ   +      PA WKPG+
Sbjct:   22 IKLHHFCSDSWTILFSHPGDFTPVCTTELGKMAQYASEFNKRGVMLLGMSCDDLESHKEWIKDIEAHTPGAKVNYPIISDPKREIIKQLNMVDPDEKDSNGNLPSRALHIVGPDKKIKLSFLYPAQTGRNMDEVLRVVESLQKASKY-KIATPANWKPGE 180          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TSA_ONCVO (Putative peroxiredoxin OS=Onchocerca volvulus GN=TSA PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15
Identity = 61/184 (33.15%), Postives = 89/184 (48.37%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQT-----DRKSGGLGD---LKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            DF AE   ++ FI+    D+IGK  + ILF +P DFT VC TE+        EF+K N +++G+S DS  SH  W          K  G      L YP+IAD  +S++   G++ PD+       +  R +FII  +  ++ S +     GR+ D  LR + +LQ          P  WK GD
Sbjct:   13 DFQAET--NEGFIS-SFYDWIGKDSWAILFSHPRDFTPVCTTELARLVQLAPEFKKRNVKLIGLSCDSADSHSKWADDILALYKMKCVGCDSEKKLPYPIIADEDRSLATELGMMDPDERDEKGNTLTARCVFIIGSDKTLKLSILYPATTGRNFDEILRVVDSLQLTAVKL-VATPVDWKDGD 192          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX6_CHICK (Peroxiredoxin-6 OS=Gallus gallus GN=PRDX6 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 8.663e-15
Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGG---LGDLKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSM 517
            ++  D++G  + ILF +P DFT VC TE+        EF K N +++ +S DSV  HLAW +      G   +  L +P+IAD  + ++   G+L PD+       +  R +FI   +  ++ S +     GR+ D  LR + +LQ +        P  WK GD  M
Sbjct:   22 IRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFSKRNVKMIALSIDSVPDHLAWSKDINAYNGDQPVEKLPFPIIADKDRELAVKLGMLDPDERDKDGMPLTARVVFIFGPDKKLKLSILYPATTGRNFDEILRVVDSLQ-LTAYKKVATPVDWKCGDSVM 187          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: REHY_TORRU (Probable 1-Cys peroxiredoxin OS=Tortula ruralis PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 50/175 (28.57%), Postives = 85/175 (48.57%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            D   +   D    ++K+ DY    + I+F +P D+  VC TE+        EFEK   ++LG+STD+V  H  W++          + YP++AD  + I+ +  ++ PD+       +A R L II  +  ++ S +     GR+ D  LR L +LQ   ++     PA W+ G+
Sbjct:    9 DLVPDIQADSTMGHIKVRDYCKDGWTIIFSHPGDYPPVCTTELGKIAAYNPEFEKRGVKLLGLSTDTVEDHQGWIKDIESYTPDAPVLYPILADPDRKITVALNMMDPDEKDANGKPLASRALHIIGPDCRLKLSLLYPGTTGRNFDEVLRVLDSLQLASKH-KIATPANWQKGE 182          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: REHYB_ORYSJ (1-Cys peroxiredoxin B OS=Oryza sativa subsp. japonica GN=Os07g0638400 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14
Identity = 51/187 (27.27%), Postives = 87/187 (46.52%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKE 544
            D   +   D     ++L D++G  YVI+F +P DFT VC TE++       EF+K   ++LG S D V SH  W++          + +P++AD  +   +   ++  D+       +  R L I+  +  ++ S +     GR++   LR   AL     +     P  WKPG++ + P P +S E
Sbjct:    8 DVVPDLELDTTHGKIRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDWIKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKLSFLFPACTGRNMAEVLRATDALLTAARH-RVATPVNWKPGERVVIP-PGVSDE 192          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX6_RAT (Peroxiredoxin-6 OS=Rattus norvegicus GN=Prdx6 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 2
Query:   41 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLG---DLKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSM 517
            +++  D++G  + ILF +P DFT VC TE+        EF K N +++ +S DSV  H AW +      G      L +P+I D  + ++   G+L P +       +  R +FI   +  ++ S +     GR+ D  LR + +LQ    NP    P  WK G+  M
Sbjct:   22 HIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHFAWSKDINAYNGAAPTEKLPFPIIDDKDRDLAILLGMLDPAEKDEKGMPVTARVVFIFGPDKKLKLSILYPATTGRNFDEILRVVDSLQLTASNP-VATPVDWKKGESVM 188          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: 1CPX_DIRIM (1-Cys peroxiredoxin OS=Dirofilaria immitis PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 61/188 (32.45%), Postives = 87/188 (46.28%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQT------------DRKSGGLGDLKYPLIADITKSISKSYGILIPDQ------GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            DF AE   ++ FI     D+IGK  + ILF +P DFT VC TE+        EF K N +++G+S DS  SH  WV              D    G   L +P+IAD  + ++   G++ PD+       +  R +FII  E  ++ S +     GR+ D  LR + +LQ          P  WK GD
Sbjct:   13 DFRAET--NEGFIP-SFYDWIGKDSWAILFSHPRDFTPVCTTELARLVQLAPEFNKRNVKLIGLSCDSAESHRKWVDDIMAVCKMKCNDGDTCCSG-NKLPFPIIADENRFLATELGMMDPDERDENGNALTARCVFIIGPEKTLKLSILYPATTGRNFDEILRVVDSLQLTAVKL-VATPVDWKDGD 195          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX6_PIG (Peroxiredoxin-6 OS=Sus scrofa GN=PRDX6 PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.299e-14
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGG---LGDLKYPLIADITKSISKSYGILIP----DQG--IALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSM 517
            ++  D++G  + ILF +P DFT VC TE+        EF K N +++ +S DSV  HLAW +      G      L +P+I D ++ ++   G+L P    +QG  +  R +FI   +  ++ S +     GR+ D  LR + +LQ   E      P  WK GD  M
Sbjct:   23 IRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKMIALSIDSVEDHLAWSKDINAYNGEEPKETLPFPIIDDKSRDLAIQLGMLDPAEKDEQGMPVTARVVFIFGPDKKLKLSILYPATTGRNFDEILRVIISLQLTAEK-RVATPVDWKNGDSVM 188          
The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TDXH_METTM5.999e-1630.92Probable peroxiredoxin OS=Methanobacterium thermoa... [more]
TDXH_CHLTE5.999e-1633.80Probable peroxiredoxin OS=Chlorobium tepidum GN=CT... [more]
REHY_MEDTR3.888e-1530.631-Cys peroxiredoxin OS=Medicago truncatula PE=2 SV... [more]
TSA_ONCVO5.078e-1533.15Putative peroxiredoxin OS=Onchocerca volvulus GN=T... [more]
PRDX6_CHICK8.663e-1531.14Peroxiredoxin-6 OS=Gallus gallus GN=PRDX6 PE=2 SV=... [more]
REHY_TORRU1.930e-1428.57Probable 1-Cys peroxiredoxin OS=Tortula ruralis PE... [more]
REHYB_ORYSJ2.520e-1427.271-Cys peroxiredoxin B OS=Oryza sativa subsp. japon... [more]
PRDX6_RAT2.520e-1429.76Peroxiredoxin-6 OS=Rattus norvegicus GN=Prdx6 PE=1... [more]
1CPX_DIRIM3.292e-1432.451-Cys peroxiredoxin OS=Dirofilaria immitis PE=2 SV... [more]
PRDX6_PIG4.299e-1431.74Peroxiredoxin-6 OS=Sus scrofa GN=PRDX6 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bp
TGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGC
TTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTG
GACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCTGTGACCGATA
TGCTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCTCAACTGACA
GTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAGTCAGGTGGT
CTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAAATCAATTTC
AAAATCCTATGGTATTCTGATCCCTGATCAGGGAATTGCATTGAGAGGAC
TCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACCATTATCAAC
CTTGCCATTGGTAGGAGTGTTGACTAGACACTGAGAACACTTCAGGCCTT
GCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGC
CCGGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTT
GCAGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGT
CTATTAGGGAGGTGTAGATGAGTTTTGTTTTTCCATGTAATGTGATTTTG
CTACTTACTGTTGAGTTTTGCGGAGCAGCCTGTGGGGAATAAATGCATTG
GACTGGATTTGTCCACCTCTTTACTTCCTTTGTAATGCAGACACAACAAA
ATCTCTTGGTATTGTCCTCTTCA
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