CF834945

Overview
NameCF834945
Unique NameCF834945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11471 contig Csv1_Contig11471:353..1125. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH2_PICTO (Probable peroxiredoxin 2 OS=Picrophilus torridus GN=PTO0727 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.522e-27
Identity = 64/175 (36.57%), Postives = 105/175 (60.00%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI*EG 568
            + LSDY   K+V+LF +P DFT +C TE   F  RY +F++LN E++G+S DS+ SH+ W++   +  G+ ++++P+IADI K I++ Y ++  + G  +RG+FIID    ++         GR++D  LR+++ALQ    +     P  W+PGDK + P P   ++    I EG
Sbjct:   21 ISLSDY-KNKWVLLFSHPADFTPICTTEFIEFSRRYNDFKELNVELIGLSVDSLQSHIEWLKDIYEKFGI-EIQFPVIADINKEIAREYNLIDENAGNTVRGVFIIDPNQTVRWMIYYPAETGRNIDEILRSVKALQ-ANWSRKIATPVNWRPGDKGILPPPSTLEDALQRIREG 192          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_STAHJ (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ahpC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27
Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = 2
Query:   32 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523
            EF  V   D  G  + ++ FYP DF+FVCPTE+    ++Y + + L   +  VSTD+ F H AW      S  +  ++Y +I D +++I++++ +L  + G+A RG FIID +GV+Q + I    IGR     +  ++A QYV+++P EVCPA W+ G +S++P
Sbjct:   22 EFKEVSQDDLKGS-WSVVCFYPADFSFVCPTELEDLQNQYDKLQDLGVNVFSVSTDTHFVHKAWHD---HSDAISKIQYQMIGDPSQTITRNFDVLDEEAGLAQRGTFIIDPDGVVQAAEINADGIGRDASTLVNKIKAAQYVRQHPGEVCPAKWEEGSESLQP 181          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_STAS1 (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=ahpC PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.395e-26
Identity = 61/175 (34.86%), Postives = 103/175 (58.86%), Query Frame = 2
Query:    5 FAAEAVFDQ--EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523
            F A A   Q  EF  V   +  G  + ++ FYP DF+FVCPTE+     +Y + ++L   +  VSTD+ F H AW      S  +  ++Y +I D +++I++++ +L  + G+A RG FI+D +GV+Q + +    IGR     +  ++A QYV+++P EVCPA W+ G ++++P
Sbjct:   11 FTANAYDPQKDEFFEVSDENLKGS-WSVVCFYPADFSFVCPTELEDLQGQYDKLQELGVNVYSVSTDTHFVHKAWHD---HSDAISKIQYTMIGDPSQTITRNFDVLDEELGLAQRGTFIVDPDGVVQAAEVNADGIGRDASTLVHKIKAAQYVRQHPGEVCPAKWEEGSETLQP 181          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_HYPBU (Probable peroxiredoxin OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0228 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25
Identity = 57/152 (37.50%), Postives = 94/152 (61.84%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA-LRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGW 496
            +KL D+   K+ +LF +P DFT VC TE  AF  RY +F+KLNTE++G+S DS FSH+ W +  ++  G+ ++ +P+IAD T  ++K  G+L      A +R +F++D +GV++        +GR++D  LR +++LQ + +      PA W
Sbjct:   24 IKLPDHFRGKWFVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSTFSHIKWAEWIKEKLGV-EIPFPIIADPTGEVAKKLGLLHAQSSTATVRAVFVVDDKGVVRAILYYPQEVGRNIDEILRLIESLQ-ISDKYGRAIPANW 173          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH2_SULTO (Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN=ST2442 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.174e-25
Identity = 63/172 (36.63%), Postives = 106/172 (61.63%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA-LRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKP----GDKSMKPDPKLSKE 544
            +KL DY   K+ +LF +P DFT VC TE  +F  +Y EF+KLNTE++G+S DS  SH+ WV    K+  + ++ +P+IAD   +++K  G++  +   + +R +FI+D +G+++      + IGR++D  LR+++ALQ V ++   V PA W      G+K + P P+  K+
Sbjct:   25 IKLPDYYQGKWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWVMWIEKNLKV-EIPFPIIADPMGNVAKRLGMIHAESSTSTVRAVFIVDDKGIVRLIMYYPMEIGRNIDEILRSIRALQLVDKS-GVVIPANWPNNELIGNKVINPPPRTVKD 194          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH2_THETN (Probable peroxiredoxin 2 OS=Thermoanaerobacter tengcongensis GN=TTE2186 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25
Identity = 71/183 (38.80%), Postives = 105/183 (57.38%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQ--GIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKE 544
            DF A + F      +KLSDY GK +V+LF +P DFT VC TE  AF   Y  F + N +++G+S DS  SHLAWV+   K+ G+ ++ +P+I D    I+K YG++ P +    A+R +FIID + +++      L IGR++   +R + ALQ V +    + PA W PG   + P PK   E
Sbjct:   23 DFKANSTFGP----IKLSDYRGK-WVVLFSHPGDFTPVCTTEFIAFTQVYTSFVERNVQLIGLSVDSNPSHLAWVENIYKTTGV-EIPFPIIEDKDMRIAKLYGMISPAETSTSAVRAVFIIDDKQILRLILYYPLEIGRNIQEIIRIIDALQTV-DKYKVLAPANWYPGMPVIVPPPKTYPE 198          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_THEP1 (Probable peroxiredoxin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0121 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.057e-24
Identity = 59/150 (39.33%), Postives = 93/150 (62.00%), Query Frame = 2
Query:   50 LSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGW 496
            L D    K+ +LF +P DFT VC TE  AF  RY EF+KLNTE++G+S D VFSH+ W++  ++  G+ ++++P+IAD    +S+  G++ P +G   +R +FI+D  G+I+        +GR++D  LR ++ALQ   E    + PA W
Sbjct:   26 LPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFKKLNTELIGLSIDQVFSHIKWIEWIKEKLGV-EIEFPVIADDLGEVSRRLGLIHPSKGTNTVRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVRALQTSDEKGVAI-PANW 173          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_THEMA (Probable peroxiredoxin OS=Thermotoga maritima GN=TM_0807 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.057e-24
Identity = 59/150 (39.33%), Postives = 93/150 (62.00%), Query Frame = 2
Query:   50 LSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGW 496
            L D    K+ +LF +P DFT VC TE  AF  RY EF KLNTE++G+S D VFSH+ W++  ++  G+ ++++P+IAD    +S+  G++ P++G   +R +FI+D  G+I+        +GR++D  LR ++ALQ   E    + PA W
Sbjct:   26 LPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRKLNTELIGLSIDQVFSHIKWIEWIKEKLGV-EIEFPVIADDLGEVSRRLGLIHPNKGTNTVRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVKALQTSDEKGVAI-PANW 173          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_AQUAE (Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_858 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.509e-24
Identity = 58/155 (37.42%), Postives = 90/155 (58.06%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQG--IALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKP 502
            VK  D    ++V+LF +P DFT VC TE  AF   Y EF+K N +++G+S DS FSH+AWV   ++  G+ ++ +P+IAD    ++K YG++ P Q     +R LF+ID +G+++      L  GR++   +R + ALQ   +      PA W P
Sbjct:   25 VKFPDDFKGQWVVLFSHPADFTPVCTTEFVAFAKNYEEFKKRNVQLIGLSVDSNFSHIAWVMNIKEKFGI-EIPFPIIADHNMEVAKKYGMIHPAQSTTFTVRALFVIDDKGILRAMIYYPLTTGRNIREVIRLVDALQ-TADREGVATPADWVP 177          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_IGNH4 (Probable peroxiredoxin OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0459 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24
Identity = 59/151 (39.07%), Postives = 93/151 (61.59%), Query Frame = 2
Query:   47 KLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQG-IALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGW 496
            KL D    K++++F +P DFT VC TE  AF  RY +F+KLNTE+LG+S D+ FSH+ W +  ++   + ++ +P+IAD    ++   G+L P+ G + +R +FI+D EG ++      L +GR++D  LR L+ALQ V +      PA W
Sbjct:   25 KLPDDYKGKWLVIFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELLGLSVDNSFSHIKWKEWIKEKLNV-EIPFPIIADPLGQVATKLGMLHPEGGVVTVRAVFIVDPEGKVRAILYYPLNVGRNIDEILRLLKALQ-VTDKLGRATPANW 173          
The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TDXH2_PICTO1.522e-2736.57Probable peroxiredoxin 2 OS=Picrophilus torridus G... [more]
AHPC_STAHJ4.428e-2737.20Alkyl hydroperoxide reductase subunit C OS=Staphyl... [more]
AHPC_STAS16.395e-2634.86Alkyl hydroperoxide reductase subunit C OS=Staphyl... [more]
TDXH_HYPBU2.430e-2537.50Probable peroxiredoxin OS=Hyperthermus butylicus (... [more]
TDXH2_SULTO3.174e-2536.63Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN... [more]
TDXH2_THETN9.234e-2538.80Probable peroxiredoxin 2 OS=Thermoanaerobacter ten... [more]
TDXH_THEP12.057e-2439.33Probable peroxiredoxin OS=Thermotoga petrophila (s... [more]
TDXH_THEMA2.057e-2439.33Probable peroxiredoxin OS=Thermotoga maritima GN=T... [more]
TDXH_AQUAE3.509e-2437.42Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_8... [more]
TDXH_IGNH44.583e-2439.07Probable peroxiredoxin OS=Ignicoccus hospitalis (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bp
TGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGC
TTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTG
GACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCTGTGACCGATA
TGCTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCTCAACTGACA
GTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAGTCAGGTGGT
CTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAAATCAATTTC
AAAATCCTATGGTATTCTGATCCCTGATCAGGGAATTGCATTGAGAGGAC
TCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACCATTATCAAC
CTTGCCATTGGTAGGAGTGTTGACTAGACACTGAGAACACTTCAGGCCTT
GCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGC
CCGGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTT
GCAGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGT
CTATTAGGGAGGTGTAGATGAGTTTTGTTTTTCCATGTAATGTGATTTTG
CTACTTACTGTTGAGTTTTGCGGAGCAGCCTGTGGGGAATAAATGCATTG
GACTGGATTTGTCCACCTCTTTACTTCCTTTGTAATGCAGACACAACAAA
ATCTCTTGGTATTGTCCTCTTCA
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