CF834948

Overview
NameCF834948
Unique NameCF834948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7404 contig Csv1_Contig7404:713..1469. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_YARLI (Sterol 24-C-methyltransferase OS=Yarrowia lipolytica GN=ERG6 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.286e-36
Identity = 78/171 (45.61%), Postives = 111/171 (64.91%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL-APDSPLPWYLPLDTSHFSLSSF-------RLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAP   G Y EI+RVLKPG  F  YEW +TD +D +N EH+ I   IE GDG+P +      ++AL+  GF++ +++DL A D+ +PWY PL      + S        R + +GR VT N++ ALE +GLAP+GS++V + LE AA  LVAGG+K++FTPM  F++RKP+
Sbjct:  208 HAPVLEGVYSEIFRVLKPGGVFGVYEWVMTDEYDESNPEHRDICYGIEKGDGIPKMYKREVAVKALENVGFDIEYQEDLAADDAEVPWYYPLAGEWKYVQSLNDIVTIGRTSRLGRMVTMNVIGALEKIGLAPQGSRQVTEALEDAAVNLVAGGKKKLFTPMMLFVSRKPE 378          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_PNECA (Sterol 24-C-methyltransferase OS=Pneumocystis carinii GN=erg6 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.935e-35
Identity = 76/170 (44.71%), Postives = 109/170 (64.12%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLA-PDSPLPWYLPLDTSHFSLSSF-------RLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAP   G Y EIYRVLKPG  +A+YEW + + +D N+ EH++I   IEIGD +P I    +   AL + GFE+I  ++L+  +SPLPWY  LD     + SF       R+T++G+++  + +  +EF+GL PKGS++V D L  AA+ LV  G+KEIFTPM  ++ RKP
Sbjct:  206 HAPSLEGVYSEIYRVLKPGGLYASYEWVMLNKYDENDPEHQQIVYGIEIGDSIPKISKIGEAEAALIKVGFEIIHSEELSTKNSPLPWYYYLDGDLRKVRSFRDFISIARMTTIGKWLISSFIGLMEFIGLLPKGSKKVNDILLVAADSLVKAGKKEIFTPMQLWVCRKP 375          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_NEUCR (Sterol 24-C-methyltransferase OS=Neurospora crassa GN=B24P7.240 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.795e-34
Identity = 72/170 (42.35%), Postives = 105/170 (61.76%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAP-DSPLPWYLPLDTSHFSLSSF-------RLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAP   G Y EIYRVLKPG  F  YEW +TD +D +N EH+ I+  IE+G+G+ ++ +  + L A+K  GFE++  +DLA  + P+PWY P+      + S+       R+T   R +       LE VGLAPKG+++  D L + A+GLVAG +K++FTPMY  + +KP
Sbjct:  208 HAPKLEGVYGEIYRVLKPGGTFGVYEWLMTDNYDNDNVEHRDIRLAIEVGNGISNMVTISEGLAAMKNVGFELVHHEDLADRNDPMPWYWPIAGELRYMQSYLDFFTVVRMTHTARRILHGFAGILETVGLAPKGTKKTADALARGADGLVAGAKKKLFTPMYLMVGKKP 377          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_MAGGR (Sterol 24-C-methyltransferase OS=Magnaporthe grisea GN=ERG6 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.003e-32
Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSP-LPWYLPLDTSHFS--------LSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAP     YK+I+ VLKPG  F  YEW +TDA+D N+  HK+I+  IE G G+ ++++ +  + A+K AGFE++  +DLA +S   PWY PL  + +         LS+F +T  GR +   ++  +E +GL P G+++  D L   A  LVAGG++ +FTPM+  +ARKP
Sbjct:  216 HAPKLEDVYKQIFNVLKPGGIFGLYEWVMTDAYDENDPHHKEIRFGIEHGGGIANLQTAQTAIAAIKAAGFELLESEDLADNSDRAPWYWPLGGNAWQYASTFGDILSTFTMTPAGRAIAHTVLGVVESIGLVPPGTKKTADSLSTTAAALVAGGKEGLFTPMFLMVARKP 386          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_SCHPO (Sterol 24-C-methyltransferase OS=Schizosaccharomyces pombe GN=SPBC16E9.05 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.611e-32
Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKC--LEALKQAGFEVIWEKDLAP-DSP-LPWYLPLDTSHFSLSS-------FRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAP   G Y EI+RVLKPG  F  YEW ++D +D +  +H++I   IE+GDG+P +   RKC  +EA+K+ GF ++ E DL   D+P LPWY PL        +       FR + +G+ VTR  V+ LE +G+A KG+ +V D L  A +GL+ GG   +FTPM+  +A+KP+
Sbjct:  204 HAPSLEGVYGEIFRVLKPGGVFGVYEWVMSDDYDSSIPKHREIAYNIEVGDGIPQM--VRKCDAVEAIKKVGFNLLEEDDLTDHDNPDLPWYYPLTGDITKCQNIWDVFTVFRTSRLGKLVTRYSVQFLEKIGVAAKGTSKVGDTLAIAQKGLIEGGETHLFTPMFLMIAKKPE 375          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: SMT2_ARATH (24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.371e-25
Identity = 63/163 (38.65%), Postives = 88/163 (53.99%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAP     Y EIYRVLKPG  + +YEW  T+ F   + EH ++   IE GD LP +R+     E  K+ GFE++ EKDLA     PW+  L          ++  +  +    +V+ L  VG+APKG+  V + L K A+ L  GG   IF+PM+  L RKP+
Sbjct:  203 HAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDDEHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRL----------KMGRLAYWRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGETGIFSPMHMILCRKPE 355          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: SMT3B_ARATH (24-methylenesterol C-methyltransferase 3 OS=Arabidopsis thaliana GN=SMT3 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25
Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAP     Y EI+RV+KPG  F +YEW  T+ +  +++EHK +   IE GD LP +RS        K+ GFEV+ EKDLA     PW+          +  ++  +  +    +V  L  +G+APKG+  V   L K A+ L  GG   IF+PM+  L RKP+
Sbjct:  203 HAPKLEEVYSEIFRVMKPGSLFVSYEWVTTEKYRDDDEEHKDVIQGIERGDALPGLRSYADIAVTAKKVGFEVVKEKDLAKPPSKPWW----------NRLKMGRIAYWRNHVVVVILSAIGVAPKGTVDVHKMLFKTADYLTRGGETGIFSPMHMILCRKPE 355          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: SMT2_ORYSJ (24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Smt2-1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.186e-22
Identity = 59/162 (36.42%), Postives = 83/162 (51.23%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAP     Y E++RVLKPG  + +YEW  T  +  +N EH +    IE GD LP +R   +     K+ GFEV+ E DLA    LPW+  L          ++  +  +    +V+ L  + +APKG   V + L + A+ L  GG   IFTPM+  L RKP
Sbjct:  208 HAPRLQDVYGEVFRVLKPGGLYVSYEWVTTSLYRADNPEHVEAIHGIERGDALPGLRRQDEIASIAKEVGFEVLKELDLALPPALPWWTRL----------KMGRIAYWRNSLVVRVLTMLRIAPKGVCEVHEMLYETAQHLTRGGETGIFTPMHMVLLRKP 359          
The following BLAST results are available for this feature:
BLAST of CF834948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ERG6_YARLI2.286e-3645.61Sterol 24-C-methyltransferase OS=Yarrowia lipolyti... [more]
ERG6_PNECA1.935e-3544.71Sterol 24-C-methyltransferase OS=Pneumocystis cari... [more]
ERG6_NEUCR2.795e-3442.35Sterol 24-C-methyltransferase OS=Neurospora crassa... [more]
ERG6_MAGGR2.003e-3240.35Sterol 24-C-methyltransferase OS=Magnaporthe grise... [more]
ERG6_SCHPO7.611e-3242.53Sterol 24-C-methyltransferase OS=Schizosaccharomyc... [more]
SMT2_ARATH2.371e-2538.6524-methylenesterol C-methyltransferase 2 OS=Arabid... [more]
SMT3B_ARATH6.900e-2537.4224-methylenesterol C-methyltransferase 3 OS=Arabid... [more]
SMT2_ORYSJ4.186e-2236.4224-methylenesterol C-methyltransferase 2 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834948 ID=CF834948; Name=CF834948; organism=Citrus sinensis; type=EST; length=758bp
TTTTGCGGAGAAGTCGCACATATTTTGTTAAAGTACAAATGTCTCCACCT
TTGTAGAGGGTATAGAAGGAAAAAGACAGAACTGGTCAAGACCTAGAACT
AAACAAAGAGGAAATAACAAAAAACAAATCAAATGGCACAAAATGACTCC
AGGGGTGATAAAACATAAACATATTAAATTAAGAAAATAGATAATAGAAA
TTGCTCGAAACTAAGTCCTCCGCCCAAGATTCGCAACTGAAGCTACTCAT
TTTACAGATCAGCCATGTTGTGGCTTGCGGGCCAAAAAGAAGTACATTGG
CGTGAAAATCTCTTTCCTCCCGCCTGCAACCAATCCTTCTGCTGCCTTCT
CCAGAAAATCTTGAACCCTTTGACTTCCCTTTGGGGCTAGTCCCACAAAT
TCTAGGGCTTTCACCATATTTCTAGTCACAAAACGTCCAACTGATGTTAG
GCGGAAGCTACTCAGTGAAAAGTGAGACGTATCCAAAGGCAAGTACCATG
GGAGAGGTGAGTCTGGAGCAAGATCTTTCTCCCATATCACCTCAAAACCA
GCTTGTTTCAGAGCTTCCAAGCATTTTCTAGTCGACCTGATGTCTGGAAG
CCCATCACCAATCTCGATTTCCGCCTTAATTTTTTTATGTTCTTGATTGT
TTGGATCAAACGCATCAGTCAAGCACCATTCATATGCAGCAAAACATTGG
CCAGGCTTTAATACTCTGTAAATCTCTTTGTACCATCCATATGCATCTGG
AGCATGAC
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