CF834955

Overview
NameCF834955
Unique NameCF834955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = -1
Query:  269 KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 517
            KF+DENF  +H  PG+LSMANSGP T G QFF+ T  T +L+GKHVVFGQ+++GMD+V+ IE   ++  + N+ VVI  CG++
Sbjct:  101 KFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRTTRDKPNQDVVIIQCGEM 183          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22
Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPV---VIADCGQL 541
            GGESI G KF DENF   H  P +LSMANSGP T GSQFF+ T  T  LDGKHVVFG+++EG  +V+ +E+  S  G  ++PV    IADCG+L
Sbjct:   85 GGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLER--SEKGANDRPVEDWKIADCGEL 176          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 103.219 bits (256), Expect = 8.204e-22
Identity = 52/91 (57.14%), Postives = 62/91 (68.13%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GGESI G KF DENF  KH   G+LSMAN+G  T GSQFF+ T  T  LDGKHVVFGQ+++GM V K +E V     +  K  VIA+CG+L
Sbjct:   94 GGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.204e-22
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = -1
Query:  275 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 541
            GG+SI G KFADENF  KHT P +LSMAN+GP T GSQFF+      WLDGKHVVFG++V+G D ++  +K  S  G+    + I D G
Sbjct:   72 GGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQGKPKTTIKIVDSG 160          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQL 541
            GG+SI G KF DENF  +HT  G+LSMAN+G  T GSQFF+ TA T WLDGKHVVFG+++EG D+V  I+ V      R  K V I  CG+L
Sbjct:  105 GGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQDRPTKDVKIVKCGEL 196          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.399e-21
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 541
            G  SI G +F DENF  KHTGPG+LSMANSGP T G QFF+ TA  E+LDGKH VFG++++G+  V+ IE V   +G  N+P   V IA+CG++
Sbjct:   88 GSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENV--PTGANNRPKLQVRIAECGEM 179          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.399e-21
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNK-PVVIADCGQL 541
            GGESI G KF DENF  KHT P  LSMAN+G  T GSQFF+ T  T WLDGKHVVFG+++EG D+V AIE   + +    K  + IAD G++
Sbjct:  102 GGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGEI 193          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.828e-21
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = -1
Query:  269 KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 517
            +F DENF+ KH  PG+LSMANSGP T G QFF+ T  T +L+ KHVVFGQ+VEGMDVV+ IE   ++  + N+ V I  CG++
Sbjct:   99 RFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIENTRTTRDKPNQDVTIIQCGEM 181          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.828e-21
Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = -1
Query:  269 KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 517
            KFADENFV KH   G+LSMANSGP T G QFF+ T  T +L+GKHVVFGQ+V+GMD+V+ IE   +   + ++ V+I  CG++
Sbjct:   99 KFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIENTRTIRDKPSQDVIITQCGEM 181          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.387e-21
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLV-EGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG SI G +F DENF  KH   G++SMAN+GP T GSQFF+ T KTEWLDG+HVVFG++  +    V+AIE +GSS GR +K   I D G L
Sbjct:   88 GGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIGLL 178          
The following BLAST results are available for this feature:
BLAST of CF834955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
PPIH_EMENI6.282e-2254.22Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPID_CANAL6.282e-2256.38Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
PPID_BOVIN8.204e-2257.1440 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPIA_PARPR8.204e-2253.93Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
PPIB_ARTBE1.072e-2156.52Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIH_CRYNE1.399e-2155.32Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
PPIB_YARLI1.399e-2156.52Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIH_ASPOR1.828e-2155.42Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIH_ASPFU1.828e-2155.42Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIA_NEOCA2.387e-2156.52Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834955 ID=CF834955; Name=CF834955; organism=Citrus sinensis; type=EST; length=541bp
TTTTTTTTTTTAAAAAGGATACGGAATATAACAAGACAAGCCCCTTTTTA
TTTAAAAAGGCAGCTCATAGAAAGACATAAAAACCCTTTCATCGAGAACC
ACCACCGGAGACCCGATCCGACCCGAACAAGTAACATAGCAGGAAAATTA
GATAAAGATTAAAAGTCCTACAGACACGCCCACATAATAATAGATAACGT
AGTCAGCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTA
TCATGATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCT
TGTTGGTCCTGCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACG
TCCATCCCTTCGACGAGCTGACCGAACACAACGTGCTTCCCATCGAGCCA
CTCGGTCTTGGCCGTGCGGACGAAGAACTGAGATCCGGTGGTTCCGGGTC
CGGAATTCGCCATGGAAAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAG
TTCTCATCGGCGAATTTCTAGCCGGAGATTGATTCGCCTCC
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