CF834955

Overview
NameCF834955
Unique NameCF834955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.312e-16
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = -1
Query:  314 GGESISG*KFADENFVK-KHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSS 541
            GG SI G KF DE     KHTG G+LSMANSGP T GSQFF+  A T WLDGKH +FG++  GM V++ +  V ++S
Sbjct:   64 GGSSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.020e-16
Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = -1
Query:  341 GGESISG*KFADENFVK-KHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVK 541
            GG SI G KF DE     KHTG GILSMANSGP T GSQFFV  A T WLDGKH +FG++  GM V++
Sbjct:   64 GGSSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQ 131          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = -1
Query:  314 GGESISG*KFADE-NFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSS 541
            GG SI G KF DE     KHTG GILSMANSGP T GSQFF+  A T WLDGKH +FG++  GM +++ +  V +++
Sbjct:   64 GGSSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNN 140          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = -1
Query:  326 GGESISG*KFADENFVK-KHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKV 541
            GG SI G KF DE     KHTG G+LSMAN+GP T GSQFF+  A T WLDGKH +FG++ +GM V++ +  V
Sbjct:   64 GGSSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRMGMV 136          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 6.727e-16
Identity = 47/94 (50.00%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 541
            GGESI G  F DE+F  KH    +LSMAN G  T GSQFF+ T  T  LDG HVVFGQ++ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:   86 GGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.727e-16
Identity = 47/94 (50.00%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 541
            GGESI G  F DE+F  KH    +LSMAN G  T GSQFF+ T  T  LDG HVVFGQ++ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:   86 GGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 6.727e-16
Identity = 47/94 (50.00%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 541
            GGESI G  F DE+F  KH    +LSMAN G  T GSQFF+ T  T  LDG HVVFGQ++ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:   86 GGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.727e-16
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = -1
Query:  293 GGESISG*KFADENFVK-KHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPV 541
            GGESI G KF DE   + KHTG GILSMANSG  + GSQFF+    T WLDGKH +FG++  GM   K ++K+ +     +KP+
Sbjct:   65 GGESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGM---KVVQKMNAMQTNNDKPI 145          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.786e-16
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = -1
Query:  314 GGESISG*KFADE-NFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSS 541
            GG SI G KF DE N   KHTG GILSMANSGP   GSQFF+  A   WLDGKH +FG++  GM V++ +  V ++S
Sbjct:   64 GGSSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 8.786e-16
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = -1
Query:  266 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGS-SSGRTNKPVVIADCGQLS 541
            GGESI G  F DENF+ KH    +LSMAN G  T GSQFF+ T     LDG HVVFG ++ G +V++ IE + + ++ R    V + DCG L+
Sbjct:   85 GGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 177          
The following BLAST results are available for this feature:
BLAST of CF834955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
PPIL1_ASPFU2.312e-1655.84Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_ASPOR3.020e-1663.24Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI3.944e-1654.55Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL1_NEUCR5.151e-1656.16Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIG_RAT6.727e-1650.00Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE6.727e-1650.00Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN6.727e-1650.00Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
CYPE_DICDI6.727e-1651.19Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIL1_ASPNG8.786e-1655.84Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
NKTR_MOUSE8.786e-1647.31NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834955 ID=CF834955; Name=CF834955; organism=Citrus sinensis; type=EST; length=541bp
TTTTTTTTTTTAAAAAGGATACGGAATATAACAAGACAAGCCCCTTTTTA
TTTAAAAAGGCAGCTCATAGAAAGACATAAAAACCCTTTCATCGAGAACC
ACCACCGGAGACCCGATCCGACCCGAACAAGTAACATAGCAGGAAAATTA
GATAAAGATTAAAAGTCCTACAGACACGCCCACATAATAATAGATAACGT
AGTCAGCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTA
TCATGATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCT
TGTTGGTCCTGCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACG
TCCATCCCTTCGACGAGCTGACCGAACACAACGTGCTTCCCATCGAGCCA
CTCGGTCTTGGCCGTGCGGACGAAGAACTGAGATCCGGTGGTTCCGGGTC
CGGAATTCGCCATGGAAAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAG
TTCTCATCGGCGAATTTCTAGCCGGAGATTGATTCGCCTCC
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