CF834955

Overview
NameCF834955
Unique NameCF834955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10954 contig Csv1_Contig10954:307..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = -1 
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GG+SI G KF DENF+ KHTGPGILSMAN+GP T GSQFF+ TAKTEWLDGKHVVFG++ EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   74 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
The following BLAST results are available for this feature:
BLAST of CF834955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
PPIA_PAPAN3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE3.551e-3370.33Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834955 ID=CF834955; Name=CF834955; organism=Citrus sinensis; type=EST; length=541bp
TTTTTTTTTTTAAAAAGGATACGGAATATAACAAGACAAGCCCCTTTTTA
TTTAAAAAGGCAGCTCATAGAAAGACATAAAAACCCTTTCATCGAGAACC
ACCACCGGAGACCCGATCCGACCCGAACAAGTAACATAGCAGGAAAATTA
GATAAAGATTAAAAGTCCTACAGACACGCCCACATAATAATAGATAACGT
AGTCAGCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTA
TCATGATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCT
TGTTGGTCCTGCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACG
TCCATCCCTTCGACGAGCTGACCGAACACAACGTGCTTCCCATCGAGCCA
CTCGGTCTTGGCCGTGCGGACGAAGAACTGAGATCCGGTGGTTCCGGGTC
CGGAATTCGCCATGGAAAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAG
TTCTCATCGGCGAATTTCTAGCCGGAGATTGATTCGCCTCC
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