CF834955

Overview
NameCF834955
Unique NameCF834955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10954 contig Csv1_Contig10954:307..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = -1
Query:  266 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 541
            GGESI G KF DENF  KH  P +LSMAN+GPGT GSQFF+ T  T  LDGKHVVFG+++    +V+ IE + ++S R ++ V I+  G LS
Sbjct:   80 GGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSAGVLS 171          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = -1
Query:  275 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 541
            GGESI G KF DENF  KH  P +LSMAN+GP T GSQFF+ T  T  LDGKHVVFG++++G   V+ IE + + +     PVVI +CG
Sbjct:   77 GGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21
Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = -1
Query:  266 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQLS 541
            GGESI G KF DE F  KH  P +LSMAN+GP T GSQFF+ T  T  LDGKHVVFG+++ G  VV+ IE + + SG R  K  +I DCG+L+
Sbjct:   88 GGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGELT 180          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = -1
Query:  269 GGESISG*K-FADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 541
            G   I G K FADENF+ KH  PG+LSMAN+GP T GSQFF+ T  T +LDGKHVVFG++V+GMDVVK +E   +     + P   VVIA CG++
Sbjct:   88 GSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGEM 182          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNK---PVVIADCGQL 541
            G  SI    FADENF  +H+ PG+LSMANSGP T G QFF+  +K +WLDGKHVVFG++++G+ V++ IE V   +G  NK   PVVI+ CG++
Sbjct:   86 GVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENV--PTGPNNKPKLPVVISQCGEM 177          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNK---PVVIADCGQL 541
            G  SI    FADENF  +H+ PG+LSMANSGP T G QFF+  +K +WLDGKHVVFG++++G+ V++ IE V   +G  NK   PVVI+ CG++
Sbjct:   86 GVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENV--PTGPNNKPKLPVVISQCGEM 177          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21
Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541
            GGESI G KF DENF  KH   G+LSMAN+G  T GSQFF+ T  T  LDGKHVVFGQ+++G+ V + +E V     +  K  VIA+CG+L
Sbjct:   94 GGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = -1
Query:  293 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPV 541
            GG+SI G KFADENF  +HT  G+LSMAN+G  T GSQFF+ T  T WLDG+HVVFG+++EG ++V  IE V    GR+++PV
Sbjct:  105 GGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENV--PKGRSDRPV 185          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.071e-21
Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 541
            GG+SI G KF DENF  +HT  G+LSMAN+G  T GSQFF+ TA T WLDGKHVVFG+++EG D+V  I+ V    GR ++P   V I   G+L
Sbjct:  104 GGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNV--PKGRNDRPLKDVKIVKSGEL 195          
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = -1
Query:  269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQL 541
            GG+SI G KFADENF  +HT  G+LSMAN+G  T GSQFF+ T  T WLDG+HVVFG+++EG +VV+ IE V    G +  + V I   GQ+
Sbjct:  106 GGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQI 197          
The following BLAST results are available for this feature:
BLAST of CF834955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
PPID_CRYNE3.118e-2154.35Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPID_SCHPO4.072e-2155.0640 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPID_GIBZE4.072e-2155.91Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPIH_NEUCR5.318e-2155.79Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPIH_HUMAN5.318e-2153.19Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN5.318e-2153.19Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]
PPID_HUMAN6.945e-2154.9540 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIB_ASPNG6.945e-2157.83Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_EMENI9.071e-2155.32Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_ASPFU1.185e-2054.35Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834955 ID=CF834955; Name=CF834955; organism=Citrus sinensis; type=EST; length=541bp
TTTTTTTTTTTAAAAAGGATACGGAATATAACAAGACAAGCCCCTTTTTA
TTTAAAAAGGCAGCTCATAGAAAGACATAAAAACCCTTTCATCGAGAACC
ACCACCGGAGACCCGATCCGACCCGAACAAGTAACATAGCAGGAAAATTA
GATAAAGATTAAAAGTCCTACAGACACGCCCACATAATAATAGATAACGT
AGTCAGCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTA
TCATGATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCT
TGTTGGTCCTGCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACG
TCCATCCCTTCGACGAGCTGACCGAACACAACGTGCTTCCCATCGAGCCA
CTCGGTCTTGGCCGTGCGGACGAAGAACTGAGATCCGGTGGTTCCGGGTC
CGGAATTCGCCATGGAAAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAG
TTCTCATCGGCGAATTTCTAGCCGGAGATTGATTCGCCTCC
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