CF834955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 7.420e-23 Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = -1 Query: 266 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQLS 541 GG SI G KFADENF KH G G LSMAN+G T GSQFF+ T KT WLDG+HVVFG+++EGMDVV+ IE+ G R + V+IA G ++ Sbjct: 99 GGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAASGHIA 191
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.420e-23 Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = -1 Query: 332 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIE 541 GG SI G KF DENF KHTGPGILSMAN+GP T GSQFF+ T KT WLD KHVVFGQ++EGM +V+ +E Sbjct: 165 GGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLE 234
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.266e-22 Identity = 52/91 (57.14%), Postives = 62/91 (68.13%), Query Frame = -1 Query: 269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541 GG+SI G KF DENF KHTGPG+LSMAN G T SQFF+ K E LD KHVVFG + +GMD V+ IE GS G ++ + I +CGQL Sbjct: 2963 GGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRICITECGQL 3053
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.266e-22 Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = -1 Query: 266 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNK-PVVIADCGQLS 541 GGESI G KF DE F H+ P +LSMAN+GP T GSQFF+ + T LDGKHVVFG++++G VV+ IE +++G K PVVIADCGQLS Sbjct: 82 GGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVPKEPVVIADCGQLS 174
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22 Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 541 GG SI G +F DENF KH G G LSMAN+GP T G+QFF+ T + WLDGKHVVFG++VEGM VV+ IE + + S R K V IA+CG + Sbjct: 107 GGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCGHI 198
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 2.820e-22 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = -1 Query: 269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541 GGESI G KF DENF KH G+LSMAN+GP T GSQFF+ T T LDGKHVVFGQ+++G+ V + +E V + + K VIA+CG+L Sbjct: 94 GGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVNGEKPAKLCVIAECGEL 184
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 3.683e-22 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = -1 Query: 269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541 GGESI G KF DENF KH G+LSMAN+GP T GSQFF+ T T LDGKHVVFGQ+++G+ V + +E V + + K VIA+CG+L Sbjct: 94 GGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVNGEKPAKLCVIAECGEL 184
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.683e-22 Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = -1 Query: 269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSS--SGRTNKPVVIADCGQL 541 GG SI G KF DE+F KH GPG+LSMAN+GP T GSQFF+ T T WLD +HVVFG ++EG+DVVK +E +S KP IA G+L Sbjct: 152 GGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLDNSPKKPCKIAKSGEL 244
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.810e-22 Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVG-SSSGRTNKPVVIADCGQL 541 GGESI G KF DENF KH G+LSMANSGP T GSQFF+ T +T LDGKHVVFG++ +GM VV++IE V ++ VVI DCG++ Sbjct: 82 GGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
BLAST of CF834955 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22 Identity = 51/91 (56.04%), Postives = 60/91 (65.93%), Query Frame = -1 Query: 269 GGESISG*KFADENFVKKHTGPGILSMANSGPGTTGSQFFVRTAKTEWLDGKHVVFGQLVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 541 GG+SI G KF DENF KHTGPG+LSMAN G T SQF + K E LD KHVVFG + +GMD VK IE GS G + + I +CGQ+ Sbjct: 3134 GGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVCRRITITECGQI 3224 The following BLAST results are available for this feature:
BLAST of CF834955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834955 ID=CF834955; Name=CF834955; organism=Citrus sinensis; type=EST; length=541bpback to top |