CF834959

Overview
NameCF834959
Unique NameCF834959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_NEUCR (Histone H3 OS=Neurospora crassa GN=hh3 PE=1 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 2.496e-54
Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450
            MA TKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_MARPO (Histone H3 OS=Marchantia polymorpha PE=3 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 2.496e-54
Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450
            MA TKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_MAGGR (Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.496e-54
Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450
            MA TKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_GIBZE (Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 2.496e-54
Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450
            MA TKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_CHAGB (Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 2.496e-54
Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450
            MA TKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_USTMA (Histone H3.2 OS=Ustilago maydis GN=HHT2 PE=3 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 3.259e-54
Identity = 110/135 (81.48%), Postives = 113/135 (83.70%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450
            MA TKQTARKSTGGKAPRKQLATKAARKSAP+ GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS                 FEDTNL AIHAKRVTI PKDI LARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESAEAYLVSLFEDTNLAAIHAKRVTIQPKDIALARRLRGER 135
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_PENFN (Histone H3 OS=Penicillium funiculosum GN=HHT1 PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.257e-54
Identity = 108/136 (79.41%), Postives = 116/136 (85.29%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453
            MA TKQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_NEOFI (Histone H3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hht1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.257e-54
Identity = 108/136 (79.41%), Postives = 116/136 (85.29%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453
            MA TKQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_EMENI (Histone H3 OS=Emericella nidulans GN=hhtA PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.257e-54
Identity = 108/136 (79.41%), Postives = 116/136 (85.29%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453
            MA TKQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_ASPTN (Histone H3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=hht1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.257e-54
Identity = 108/136 (79.41%), Postives = 116/136 (85.29%), Query Frame = 1 
Query:   46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453
            MA TKQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS                 FEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
The following BLAST results are available for this feature:
BLAST of CF834959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3_NEUCR2.496e-5480.74Histone H3 OS=Neurospora crassa GN=hh3 PE=1 SV=3[more]
H3_MARPO2.496e-5480.74Histone H3 OS=Marchantia polymorpha PE=3 SV=3[more]
H3_MAGGR2.496e-5480.74Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1[more]
H3_GIBZE2.496e-5480.74Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3[more]
H3_CHAGB2.496e-5480.74Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=... [more]
H32_USTMA3.259e-5481.48Histone H3.2 OS=Ustilago maydis GN=HHT2 PE=3 SV=3[more]
H3_PENFN4.257e-5479.41Histone H3 OS=Penicillium funiculosum GN=HHT1 PE=3... [more]
H3_NEOFI4.257e-5479.41Histone H3 OS=Neosartorya fischeri (strain ATCC 10... [more]
H3_EMENI4.257e-5479.41Histone H3 OS=Emericella nidulans GN=hhtA PE=3 SV=... [more]
H3_ASPTN4.257e-5479.41Histone H3 OS=Aspergillus terreus (strain NIH 2624... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06G23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834959 ID=CF834959; Name=CF834959; organism=Citrus sinensis; type=EST; length=664bp
TTCAGATCTGCCCTTTTTGCAGTTTGTGTTGGTGATTAAAGAGTAATGGC
CCCTACGAAGCAAACCGCGCGCAAGTCAACTGGAGGAAAGGCTCCGAGGA
AGCAGCTCGCCACAAAGGCTGCAAGAAAATCTGCTCCAACAACTGGTGGA
GTCAAGAAGCCCCATCGTTACCGTCCAGGAACTGTCGCCCTACGTGAAAT
CCGCAAATATCAAAAGAGCACTGAGCTTTTGATCCGCAAGCTGCCTTTCC
AGCGGCTGGTTCGTGAAATTGCTCAAGATTTCAAGACAGATTTGAGGTTC
CAAAGCCACGCGGTTCTTGCGCTGCAGGAAGCGGCAGAGGCTTATCTCCT
GGGTCTGTTCGAGGACACCAACCTTTGTGCTATCCATGCCAAGCGAGTCA
CCATTATGCCCAAGGATATTCAACTGGCAAGGCGAATCCGAGGCGAGCGT
GCTTAATTTGTGATTCCTTAGGTAGTCGTCAGTTTCCTATTTAGTTTGCT
AGTTTTTCTTTATTTCGGTTTTTACATGTAAAGAATGATATGATGGATTG
AAGAATATTTGGCATTTGATATTTGCTAGATAAATGTTTATTGTGGAGCT
TATCTTGTTTCACTTTACCTTCATCGGTGGTTTTAAGGACTTGCGTGTAT
GGATTTTCGGCAAT
back to top