CF834959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_CANGA (Histone H3 OS=Candida glabrata GN=HHT1 PE=3 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 6.147e-53 Identity = 107/136 (78.68%), Postives = 115/136 (84.56%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_ASHGO (Histone H3 OS=Ashbya gossypii GN=HHT1 PE=3 SV=3) HSP 1 Score: 207.223 bits (526), Expect = 6.147e-53 Identity = 107/136 (78.68%), Postives = 115/136 (84.56%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3L_HUMAN (Histone H3-like OS=Homo sapiens PE=1 SV=3) HSP 1 Score: 207.223 bits (526), Expect = 6.147e-53 Identity = 111/136 (81.62%), Postives = 113/136 (83.09%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTGGKAPRKQLATKAARKS P+T GVK PHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDF TDLRFQS EDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVK-PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33L2_CAEEL (Histone H3.3-like type 2 OS=Caenorhabditis elegans GN=his-74 PE=2 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 1.369e-52 Identity = 108/136 (79.41%), Postives = 113/136 (83.09%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTGGKAPRK LATKAARKSA TG VKK HR+RPGTVALREIR+YQKSTELL+RKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3L2_ARATH (Histone H3-like 2 OS=Arabidopsis thaliana GN=MGH3 PE=2 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 1.977e-51 Identity = 107/137 (78.10%), Postives = 112/137 (81.75%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQDFK DLRFQSH FEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 1.977e-51 Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRFQS FEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 1.977e-51 Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRFQS FEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_EUPCR (Histone H3 OS=Euplotes crassus PE=3 SV=3) HSP 1 Score: 199.904 bits (507), Expect = 9.814e-51 Identity = 102/136 (75.00%), Postives = 111/136 (81.62%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARK+ GGKAPRK + K+ARK+A TT G+KKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQ+FK DLRFQS FEDTNLCAIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 1 MARTKQTARKNVGGKAPRKHIGQKSARKTASTTAGMKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQEFKGDLRFQSSAVLALQEAAEAYLVSLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3L_CAIMO (Histone H3-like OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.282e-50 Identity = 106/136 (77.94%), Postives = 108/136 (79.41%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTA KSTG KAPRKQLATKAA KSAP GGVKKPH YRPGTVAL EI +YQKSTELLI KLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRV+IMPKDIQL RRIRGERA Sbjct: 1 MARTKQTACKSTGRKAPRKQLATKAAHKSAPAMGGVKKPHCYRPGTVALHEIHRYQKSTELLICKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVSIMPKDIQLTRRIRGERA 136
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33_TETPY (Histone H3.3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 3.729e-50 Identity = 101/135 (74.81%), Postives = 111/135 (82.22%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 MA TKQTARKSTG KAPRKQLATKAARKSAP +GGVKKPH++RPGTVALREIRKYQK+T+LLIRKLPFQRLVR+IA + K D+RFQS FEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKNDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135 The following BLAST results are available for this feature:
BLAST of CF834959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834959 ID=CF834959; Name=CF834959; organism=Citrus sinensis; type=EST; length=664bpback to top |