CF834959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33_TETTH (Histone H3.3 OS=Tetrahymena thermophila GN=HHT3 PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 8.308e-50 Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 MA TKQTARKSTG KAPRKQLATKAARKSAP +GGVKKPH++RPGTVALREIRKYQK+T+LLIRKLPFQRLVR+IA + K+D+RFQS FEDTNLCAIHA+RVTIM KD+ LARRIRGER Sbjct: 1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRGER 135
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H34_TETTH (Histone H3.4 OS=Tetrahymena thermophila GN=HHT4 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.490e-48 Identity = 97/135 (71.85%), Postives = 109/135 (80.74%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 MA TKQTARKST KAPRKQLA KAARKSAP +GG+KKPH++RPGTVALREIRKYQK+T+LLIRKLPFQRLVR+IA + K+D+RFQS FEDTNLCAIHA+RVTIM KD+ LARRIRGER Sbjct: 1 MARTKQTARKSTSIKAPRKQLAAKAARKSAPISGGIKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRGER 135
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33B_DICDI (Histone H3.3 type b OS=Dictyostelium discoideum GN=H3b PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.016e-47 Identity = 98/136 (72.06%), Postives = 109/136 (80.15%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTG K PRK L K+++KS P+T G+KK HR+RPGTVALREIR+YQKS+ELLI+KLPFQRLVREIAQ+FKTDLRFQ+ FEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGAKVPRKHLGNKSSQKSFPSTQGLKKTHRFRPGTVALREIRRYQKSSELLIKKLPFQRLVREIAQEFKTDLRFQAAAIQALQEASEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRGERA 136
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33A_DICDI (Histone H3.3 type a OS=Dictyostelium discoideum GN=H3a PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.016e-47 Identity = 100/139 (71.94%), Postives = 108/139 (77.70%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAP---TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTG K PRK + +K A K P ++GGVKK HR+RPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQ+FKTDLRFQS FEDTNLCAIHAKRVTIMPKDI LARRIRGER+ Sbjct: 1 MARTKQTARKSTGAKVPRKHIGSKQAHKQTPVSSSSGGVKKVHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQEFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIHLARRIRGERS 139
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_YARLI (Histone H3 OS=Yarrowia lipolytica GN=HHT1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.326e-47 Identity = 103/139 (74.10%), Postives = 109/139 (78.42%), Query Frame = 1 Query: 46 MAPTKQT--ARKSTGGKAPRKQLATKAARKSAP---TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 447 MA TK T ARK TGGKAPRKQ+ +KAARKSA T+GGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTI KDI LARR+RGE Sbjct: 1 MARTKSTVIARKVTGGKAPRKQIGSKAARKSAAPSNTSGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQKKDIHLARRLRGE 139
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3L_MOUSE (Putative histone H3-like OS=Mus musculus PE=5 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 3.267e-46 Identity = 101/136 (74.26%), Postives = 106/136 (77.94%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKST GKAPRKQLATKAA KSAP+TGGVKK HRYRP TVAL EIR+Y STELLI KLPFQRLV+EIAQDFKTDLRFQS FEDTNLCAIHAK VT++PKDIQLA I GERA Sbjct: 1 MAHTKQTARKSTCGKAPRKQLATKAAXKSAPSTGGVKKSHRYRPDTVALLEIRRYH-STELLIHKLPFQRLVQEIAQDFKTDLRFQSAAIGALQEASEANRVGLFEDTNLCAIHAKCVTVIPKDIQLAHSILGERA 135
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33L3_CAEEL (Putative histone H3.3-like type 3 OS=Caenorhabditis elegans GN=his-69 PE=5 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.241e-45 Identity = 94/123 (76.42%), Postives = 100/123 (81.30%), Query Frame = 1 Query: 82 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 GGKAPRKQLATKAARK+A G VKKPHR+RPGTVALREIR+YQKST+LL+RKLPFQRLVREIAQD K DLRFQS FEDTNLCAIHAKRVTIMPKD+QLARRIRGER Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLVREIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGER 126
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33C_DICDI (Histone H3.3 type c OS=Dictyostelium discoideum GN=H3c PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.047e-45 Identity = 94/136 (69.12%), Postives = 106/136 (77.94%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 MA TKQTARKSTG K PRK L++K++ S P +KK HR+RPGTVALREIR+YQKS++LLI+KLPFQRLVREIAQ+FKTDLRFQ+ FEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGAKVPRKHLSSKSSFPSKPVNEVLKKTHRFRPGTVALREIRRYQKSSDLLIKKLPFQRLVREIAQEFKTDLRFQAAAIEALQEATEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRGERA 136
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H34_STYLE (Histone H3-4 (Fragment) OS=Stylonychia lemnae GN=H3-4 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.268e-39 Identity = 83/111 (74.77%), Postives = 87/111 (78.38%), Query Frame = 1 Query: 79 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMP 411 TG KAPRK LA KAARK+AP GGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIA D+K+DLRFQS FEDTNLCAIHA RVTIMP Sbjct: 2 TGAKAPRKALANKAARKTAPADGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIASDYKSDLRFQSSAVAAIQEAAEAYMVGLFEDTNLCAIHAGRVTIMP 112
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_GUITH (Histone H3 OS=Guillardia theta PE=3 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 5.052e-39 Identity = 86/134 (64.18%), Postives = 97/134 (72.39%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 447 MA TKQTARK+ GG +++ K A+ +KK HRY+PGTVALREIRKYQKST LLIRKLPFQRLVRE+AQD+K+DLRFQ+ FEDTNLCAIHAKRVTIMPKDI LARRIRGE Sbjct: 1 MARTKQTARKTVGGDI-NSRISEKRAKSDNSKNIDLKKVHRYKPGTVALREIRKYQKSTNLLIRKLPFQRLVRELAQDYKSDLRFQNSAVLALQEASESYLVNLFEDTNLCAIHAKRVTIMPKDIYLARRIRGE 133 The following BLAST results are available for this feature:
BLAST of CF834959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834959 ID=CF834959; Name=CF834959; organism=Citrus sinensis; type=EST; length=664bpback to top |