CF834959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H31_ENCCU (Histone H3.1 OS=Encephalitozoon cuniculi GN=HHT1 PE=3 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.740e-31 Identity = 72/135 (53.33%), Postives = 90/135 (66.67%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKS-APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIR 441 MA TKQ+ARK+TGGKAPRKQL+ K+ARK +P + K RYRPG+VAL+EIR+YQKST+ LIR+LPFQR R + ++ TD+RFQ FED LCA HAKRVT+ PKDI L ++R Sbjct: 1 MARTKQSARKTTGGKAPRKQLSAKSARKGVSPASSAGAKKSRYRPGSVALKEIRRYQKSTDFLIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDISLVLKLR 135
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3L3_LILLO (Histone H3-like 3 OS=Lilium longiflorum GN=leH3 PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.513e-30 Identity = 80/156 (51.28%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTT-----------------------GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 MA K AR STGGKAPRKQLA KA RK+AP T GVK+PHRYRPG + LREIRKY+K+ I KLPF RLVR+I Q+ K LRFQS FED AIHAKRVT++PKDIQLAR I G Sbjct: 1 MARMKLNARMSTGGKAPRKQLAYKAVRKAAPPTIGVKLPNSYRPGDQTVCKPAPPTDGVKEPHRYRPGKMGLREIRKYKKNARFFISKLPFHRLVRKITQNLKAHLRFQSTAMPAPEEVSEAYLVKLFED----AIHAKRVTLVPKDIQLARCIGG 152
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_ENTHI (Histone H3 OS=Entamoeba histolytica GN=H3 PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28 Identity = 76/136 (55.88%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 46 MAPTK-QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 MA TK R S K +A KAA+K KK R PG VAL EI+ Q+STELL+RK PFQ LVREIAQ K+DLRFQS FEDTNLCAIHAKR+TIMPKD+QLARRIRGER Sbjct: 1 MARTKGHIERPSNKSAKAVKNVAFKAAKKMLSKDSTKKK--RAHPGAVALTEIKVLQRSTELLLRKAPFQALVREIAQVSKSDLRFQSAAISALQEAAEAYLVGLFEDTNLCAIHAKRITIMPKDMQLARRIRGER 134
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H33_HORVU (Histone H3.3 (Fragment) OS=Hordeum vulgare PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.991e-27 Identity = 64/80 (80.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 214 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 453 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSH FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 80
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_CANAL (Histone H3-like centromeric protein CSE4 OS=Candida albicans GN=CSE4 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25 Identity = 68/106 (64.15%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 139 TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 447 T VKK RYRPGT ALREIR+YQKST+LLIRKLPF RLVREI+ DF LR+QS+ EDTNLCAIHAKRVTIM KDIQLARRIRG+ Sbjct: 104 TVPRVKK--RYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQLARRIRGQ 207
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_NEUCR (Histone H3-like centromeric protein cse-4 OS=Neurospora crassa GN=cse-4 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 68/137 (49.64%), Postives = 85/137 (62.04%), Query Frame = 1 Query: 49 APTKQTARKSTGGKAP--RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK---TDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 A +K+ A T P R++ + + P G K+ RYRPGT+AL+EIR YQ++T+LL+ KLPF RLVREIA F+ ++R+QS FEDTNLCAIHAKRVTIM KDIQLARRIRG Sbjct: 13 AVSKKAAAVPTPKATPPGRRKSRASSVQPGDPVPQGKKR--RYRPGTLALKEIRNYQRTTDLLVAKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLARRIRG 147
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3_LEIIN (Histone H3 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.250e-25 Identity = 67/136 (49.26%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR-YRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 M+ TK+TAR ++ + +K ++K+ GVK+ HR +RPGT A+REIRK+QKST LLI+ PFQRLVR + + K LRFQS DTNL IHAKRVTI PKDIQLA R+RGER Sbjct: 1 MSRTKETARA-------KRTITSKKSKKAPSGASGVKRSHRRWRPGTCAIREIRKFQKSTSLLIQCAPFQRLVRGVERQ-KEGLRFQSSAIMALQEATEAYIVSLMADTNLACIHAKRVTIQPKDIQLALRLRGER 128
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_DANRE (Histone H3-like centromeric protein A OS=Danio rerio GN=cenpa PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24 Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 112 TKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD-LRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 ++ R S P+ +K H++RPGT AL EIRKYQKST LL+RK PF RLVRE+ Q F + + +Q + F D NLCAIHAKRVT+ P+DIQLARRIRG Sbjct: 30 SRTRRHSGPSGSSPRKKHKFRPGTRALMEIRKYQKSTGLLLRKAPFSRLVREVCQMFSREHMMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTLFPRDIQLARRIRG 141
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_SCHPO (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe GN=cnp1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.590e-24 Identity = 61/99 (61.62%), Postives = 71/99 (71.72%), Query Frame = 1 Query: 166 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD----FKTD--LRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 RYRPGT ALREIRKYQ+ST+LLI++LPF R+VREI+ + F TD LR+QS FEDTNLCAIHAKRVTIM +D+QLARRIRG Sbjct: 21 RYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24 Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 166 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 RYRPGT ALREIR+YQ+S+ELLIRKLPF RLV+E+A+++ +R+QS+ EDTNLCAIHAKRVTIM KDIQLARRIRG Sbjct: 61 RYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156 The following BLAST results are available for this feature:
BLAST of CF834959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834959 ID=CF834959; Name=CF834959; organism=Citrus sinensis; type=EST; length=664bpback to top |