CF834959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3L_ENCCU (Histone H3-like protein OS=Encephalitozoon cuniculi GN=ECU09_0450 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23 Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTG---GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIR 441 M+ TKQTA K+ GGKAPRK ++ K S P++G + K R++ G +AL+EIRKYQKST+LLIRK PFQR+VR++ + + +RFQ+ ED C +HAKRVT+MPKDI L +I+ Sbjct: 1 MSRTKQTASKALGGKAPRKGISAK----SIPSSGCSPAMPKRTRFKAGALALKEIRKYQKSTDLLIRKRPFQRMVRDLCKG-REGVRFQASAIVAFQEAVENFLTSLMEDAYRCVLHAKRVTLMPKDICLVYKIK 130
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_YARLI (Histone H3-like centromeric protein CSE4 OS=Yarrowia lipolytica GN=CSE4 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.290e-22 Identity = 62/125 (49.60%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 82 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF----KTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 GG P Q + TT + KP RY+PG AL+EIR+YQ+ TELLI KLPF R+VRE+A ++ +L++QS FED NLCAIHAKRVTIM KD+QLARRIRG Sbjct: 21 GGLHPLGQTRKTLPGERRDTTQKITKP-RYKPGQKALKEIRRYQRGTELLIAKLPFARVVREVALNYLGSEYGNLQWQSMALLALQEAAEAFLVHLFEDVNLCAIHAKRVTIMQKDMQLARRIRG 144
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_ASHGO (Histone H3-like centromeric protein CSE4 OS=Ashbya gossypii GN=CSE4 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22 Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 40 RVMAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 447 RV+ + A + R++ + T KKP RYRP VAL+EIR+YQ+STELLI ++PF RLV+E+ F T +R+QS E TNL A+HAKRVT+M KD+QLARRIRG+ Sbjct: 64 RVVERVAEPAAAESRADGAREEERPARPARPRETRRIAKKPQRYRPSDVALQEIRRYQRSTELLISRMPFARLVKEVTDQFTTVDQQMRWQSMAILALQEASEAYIVGLLEHTNLLALHAKRVTVMRKDMQLARRIRGQ 202
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_XENTR (Histone H3-like centromeric protein A OS=Xenopus tropicalis GN=cenpa PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.132e-21 Identity = 64/138 (46.38%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 40 RVMAPTKQTARKSTGG-KAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--QSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 RV P T+ +S G AP ++ A +A K R+RPGT AL EIRKYQKSTELLIRK PF RLVRE+ + L + QS FED+ LC++HAKRVT+ +DIQLARRIRG Sbjct: 18 RVSPPLPTTSTRSPGRPSAPEQRKAPRATPKK-----------RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGLNYSWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_XENLA (Histone H3-like centromeric protein A OS=Xenopus laevis GN=cenpa PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21 Identity = 65/137 (47.45%), Postives = 79/137 (57.66%), Query Frame = 1 Query: 40 RVMAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--QSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 RV P T+R T + P Q +A+R S KK R+RPGT AL EIRKYQKSTELLIRK PF RLVRE+ + + + QS FED+ LC++HAKRVT+ +DIQLARRIRG Sbjct: 18 RVSPPLPTTSR--TSPRRPHAQQQRRASRASP------KK--RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGMNYNWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_YEAST (Histone H3-like centromeric protein CSE4 OS=Saccharomyces cerevisiae GN=CSE4 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.996e-19 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 166 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 447 +Y P +AL EIRKYQ+ST+LLI K+PF RLV+E+ +F T DLR+QS E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 131 KYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 227
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_KLULA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces lactis GN=CSE4 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 166 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 447 RY+P +AL EIRKYQ+ST+LLI ++PF RLV+E+ F T+ LR+QS E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 86 RYKPTDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 182
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_KLUMA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces marxianus GN=CSE4 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 166 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 447 +Y+P +AL EIRKYQ+ST+LLI ++PF RLV+E+ F +D LR+QS E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 94 KYKPSDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFASDEEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 190
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_TETTH (Histone H3-like centromeric protein CNA1 OS=Tetrahymena thermophila GN=CNA1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17 Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 97 RKQLATKAARKSAPT---TGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF--KTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 450 R + +TK R+S+ + K R+RPG AL+++R+Y ++ LLIRKLPFQRL+REI+ + LR+ S FED N CA+HAKRVT+M KD+ LA RIRG++ Sbjct: 54 RNKASTKKKRESSGEKYESARDKVIRRFRPGDNALKQLRQYNQTPSLLIRKLPFQRLIREISTRMTEEDSLRWTSFALVLLQTVVEDYMVSFFEDANACALHAKRVTLMSKDLALAARIRGQK 176
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: CENPA_CHICK (Histone H3-like centromeric protein A OS=Gallus gallus GN=CENPA PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17 Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 157 KPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRG 444 + RYRPG ALREIR+YQ ST LL+R+ PF R+VREI F D R+Q+ ED LC++HA+RVT+ PKD+QLARR+RG Sbjct: 28 RARRYRPGQRALREIRRYQSSTALLLRRQPFARVVREICLLFTRGVDYRWQAMALLALQEAAEAFLVHLLEDAYLCSLHARRVTLYPKDLQLARRLRG 125 The following BLAST results are available for this feature:
BLAST of CF834959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834959 ID=CF834959; Name=CF834959; organism=Citrus sinensis; type=EST; length=664bpback to top |