CF834959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: HCP3L_CAEBR (Histone H3-like centromeric protein cpar-1 OS=Caenorhabditis briggsae GN=cpar-1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13 Identity = 48/101 (47.52%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 151 VKKPH--RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREI--AQDFKT-DLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRI 438 V K H ++RPG AL EIRKYQKST++LI+K PF RLV EI Q +K+ D R ++ FE + L HAKRVT+MP DIQL RR+ Sbjct: 239 VTKTHNRKFRPGQKALAEIRKYQKSTDMLIQKAPFVRLVHEIIREQTYKSQDYRIRADALMALQEAAEAFMVEMFEGSVLICNHAKRVTLMPTDIQLYRRL 339
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H3L2_LILLO (Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13 Identity = 47/89 (52.81%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKS-APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSH 309 MA K TAR STGGKAPRKQLA+KA RK+ P T GVK+P G RKLPFQ LVR+I QD KT LRF++H Sbjct: 1 MARMKHTARMSTGGKAPRKQLASKALRKAPPPPTKGVKQPTTTTSGKWRFARFH----------RKLPFQGLVRKIWQDLKTHLRFKNH 79
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETTR (Histone H3.2 (Fragment) OS=Tetrahymena tropicalis PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETSO (Histone H3.2 (Fragment) OS=Tetrahymena sonneborni PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETRO (Histone H3.2 (Fragment) OS=Tetrahymena rostrata PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETPR (Histone H3.2 (Fragment) OS=Tetrahymena paravorax PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETPI (Histone H3.2 (Fragment) OS=Tetrahymena pigmentosa PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETPA (Histone H3.2 (Fragment) OS=Tetrahymena patula PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETNI (Histone H3.2 (Fragment) OS=Tetrahymena nippisingi PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of CF834959 vs. ExPASy Swiss-Prot
Match: H32_TETNA (Histone H3.2 (Fragment) OS=Tetrahymena nanneyi PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 46 MAPTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 168 MA TKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41 The following BLAST results are available for this feature:
BLAST of CF834959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834959 ID=CF834959; Name=CF834959; organism=Citrus sinensis; type=EST; length=664bpback to top |