CF834977

Overview
NameCF834977
Unique NameCF834977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1716..2417. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.884e-34
Identity = 78/140 (55.71%), Postives = 95/140 (67.86%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPKVTPDV--IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVT G       P    I   TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  227 GTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.884e-34
Identity = 74/139 (53.24%), Postives = 95/139 (68.35%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVTPG   P K TP+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  226 GTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34
Identity = 74/139 (53.24%), Postives = 95/139 (68.35%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVTPG   P K TP+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  226 GTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34
Identity = 77/139 (55.40%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVTPG     K + + IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  226 GTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34
Identity = 78/139 (56.12%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            G L KPNMV  G++ P K T + I + TVR LQRT+P A+  VVFLSGGQ+E EAT NLNAMN L  + PW+LSFS+GRALQ S +  W G+  NV+ A+  +L R K NS A LG Y G+   G  A+ESL+VKDYKY
Sbjct:  221 GALLKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNR-PWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTG-SASESLYVKDYKY 357          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34
Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY-KGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVT G  A K TP+ IA  TV+AL+RT+PAAV  V FLSGGQSEEEAT NL+A+N +   +PW+L+FS+GRALQ S L+AWAGK+EN+   Q   L R KAN +A  G Y  G A  G G   SL V ++ Y
Sbjct:  226 GTLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSG---SLFVANHAY 361          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVT G    K  + +  A  TV ALQRT+P AVP VVFLSGGQSE +ATRNLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +SL V ++ Y
Sbjct:  226 GTLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33
Identity = 76/139 (54.68%), Postives = 95/139 (68.35%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            G L KP+MVTPG+EA  + TP+ +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  264 GILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33
Identity = 72/139 (51.80%), Postives = 91/139 (65.47%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVTPG   PK  TP  +A  TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  226 GTLLKPNMVTPGHSCPKKFTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.083e-33
Identity = 76/139 (54.68%), Postives = 95/139 (68.35%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVTPG     K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  226 GTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
The following BLAST results are available for this feature:
BLAST of CF834977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_CAEEL1.884e-3455.71Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOC_MACFA1.884e-3453.24Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN2.461e-3453.24Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDOA_RAT2.461e-3455.40Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALF_DICDI4.198e-3456.12Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_DROME7.160e-3456.83Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALF_ECHMU9.351e-3456.83Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALFC1_ARATH1.595e-3354.68Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALDOB_SPAAU1.595e-3351.80Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOA_RABIT2.083e-3354.68Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06H12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834977 ID=CF834977; Name=CF834977; organism=Citrus sinensis; type=EST; length=704bp
CCTTTTTTTTTTACAAAGAAACATTATCAATTATGTGACAAAATCACAGA
AACCTCTTTGAAATTAGGGGAAAGGAAAAAAAAAGAAAAACAAAACCCTT
AGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAG
TTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCTAAAACTA
TGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACTCTCATAA
AGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAG
TCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCACC
CTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGA
AAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTG
AGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTGACCATGG
CTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCT
CCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGC
ATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGTCCGGTGT
AACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTCCAAAGGG
TACC
back to top