CF834978

Overview
NameCF834978
Unique NameCF834978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.863e-70
Identity = 137/230 (59.57%), Postives = 166/230 (72.17%), Query Frame = 2
Query:   44 GKYPDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSET 733
            G Y DEL+K A  I +PG+GILA DES  T GKRL SI +EN EANR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGIKVDKG V LAG+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGLVPIVEPEIL+DG H I++  +V ++V A  +  L +++V  EG LLKP+MVTPG+E+
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAES 229          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.368e-69
Identity = 136/230 (59.13%), Postives = 166/230 (72.17%), Query Frame = 2
Query:   44 GKYPDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSET 733
            G Y DEL+K A  I +PG+GILA DES  T GKRL+SI +EN E NR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGIKVDKG V LAG+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGLVPIVEPEIL+DG H I++  +V ++V A  +  L +++V  EG LLKP+MVTPG+E+
Sbjct:    7 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAES 235          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.745e-69
Identity = 134/229 (58.52%), Postives = 166/229 (72.49%), Query Frame = 2
Query:   44 GKYPDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE 730
            G Y DEL+K A  I +PG+GILA DES  T GKRL+SI ++N E NR+A R+LL  TPG   Y+SG ILFEETLYQ T  GK FVD L++  ++PGIKVDKG   LAG+N E+  QGLDGLA R  +YY+ GARFAKWR V+ + P  PS LA+ E A GLARYA I Q+NGLVPIVEPEIL+DG H I +  +V E+V +  +  L  ++V+ EG LLKP+MVTPG+E
Sbjct:   42 GAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSV-PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVMFEGILLKPSMVTPGAE 269          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 9.800e-69
Identity = 136/227 (59.91%), Postives = 163/227 (71.81%), Query Frame = 2
Query:   50 YPDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE 730
            Y DEL+K A  I +PG GI+A DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E  ++PGIKVDKG V L G+  E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q++GLVPIVEPEI++DG H I++  DV E+V A  +  L  ++V+ EG LLKP+MVTPG+E
Sbjct:   52 YADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAE 277          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.800e-69
Identity = 135/224 (60.27%), Postives = 168/224 (75.00%), Query Frame = 2
Query:   59 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGP--NEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPG 724
            EL + A  +   GKGILAADEST TI KR  +I +EN   NR + R+LLF T G  +++SG ILFEETL+QK  AG P V++L + G++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWRAVL I P   +P+ L+I E + GLARYA ICQ+N LVPIVEPEIL DG H I  CA VT++VLA+ +KAL+D+ VLLEG  LKPNMVT G
Sbjct:   10 ELAETAKKLVAAGKGILAADESTQTIKKRFDNIKIENTVQNRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPLVNLLHDEGIIPGIKVDKGLVSIPCTDDEKSTQGLDGLAERCKEYYKAGARFAKWRAVLVIDPAKGKPTDLSIQEVSWGLARYASICQQNKLVPIVEPEILADGAHTIEVCATVTQKVLASVFKALHDNGVLLEGASLKPNMVTAG 233          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.672e-68
Identity = 139/225 (61.78%), Postives = 164/225 (72.89%), Query Frame = 2
Query:   56 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPG 724
            DEL   A  I TPGKGILAADESTG++ KRL+SI +EN E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEPEIL DG H + +   +TE VL+  Y ALN+HHV LEGTLLKPNMVT G
Sbjct:   14 DELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSG 238          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.415e-67
Identity = 134/227 (59.03%), Postives = 166/227 (73.13%), Query Frame = 2
Query:   56 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKI--GPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE 730
            +EL   A  +   GKGILAADEST TI KR  +I +EN   NR + R+LLF T G  +++SG ILFEETL+QK  AG P V++L    ++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWR VL I     +P+ L+I+E A GLARYA ICQ+N LVPIVEPEIL DGPH I  CA VT++VL+  +KAL ++ VLLEG LLKPNMVT G E
Sbjct:   20 EELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYE 246          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.415e-67
Identity = 134/227 (59.03%), Postives = 166/227 (73.13%), Query Frame = 2
Query:   56 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKI--GPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE 730
            +EL   A  +   GKGILAADEST TI KR  +I +EN   NR + R+LLF T G  +++SG ILFEETL+QK  AG P V++L    ++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWR VL I     +P+ L+I+E A GLARYA ICQ+N LVPIVEPEIL DGPH I  CA VT++VL+  +KAL ++ VLLEG LLKPNMVT G E
Sbjct:   20 EELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYE 246          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 253.832 bits (647), Expect = 7.023e-67
Identity = 133/226 (58.85%), Postives = 164/226 (72.57%), Query Frame = 2
Query:   50 YPDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS 727
            Y DEL+K A  + +PG+GILA DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E G++PGIKVDKG + L G+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGL PI+EPEI++DG H I++   V ++V A  +  L +++VLLEG+ LKP+MV PG+
Sbjct:   49 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGA 273          
BLAST of CF834978 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.485e-66
Identity = 122/225 (54.22%), Postives = 161/225 (71.56%), Query Frame = 2
Query:   56 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE 730
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + E G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTD 228          
The following BLAST results are available for this feature:
BLAST of CF834978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC2_PEA8.863e-7059.57Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC1_PEA3.368e-6959.13Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH5.745e-6958.52Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC1_ARATH9.800e-6959.91Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALF2_PLABA9.800e-6960.27Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALF1_CAEEL1.672e-6861.78Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_PLAFA1.415e-6759.03Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF71.415e-6759.03Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALFC_SPIOL7.023e-6758.85Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF1_XYLFT3.485e-6654.22Probable fructose-bisphosphate aldolase class 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834978 ID=CF834978; Name=CF834978; organism=Citrus sinensis; type=EST; length=742bp
CAAATTTTCTACTCTTAAGTAGATCACCATGTCTTGCTTCAAGGGCAAAT
ACCCCGATGAGCTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAG
GGTATCCTTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATC
CAGCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGC
TCCTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTC
TTCGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGA
TGTCTTGAAGGAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTA
CTGTTGAGCTTGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGAT
GGCCTCGCCCAGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGC
CAAATGGCGTGCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGG
CCATCAATGAGAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAG
GAGAATGGCCTTGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCC
CCATGACATCAACAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCAT
GCTACAAGGCTCTGAATGACCACCATGTCCTTCTTGAGGGTACCCTTTTG
AAGCCCAACATGGTGACCCCTGGATCTGAAACTCCCAAAGTT
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