CF834983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 1.796e-16 Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYGKLLKDFNKGLVNN----KDMEALKADVEKFASSFDMPG 540 GD SAL PGG+R+GTPA+TSRG E+DFE++G+F H GV + + E GK LKDF N +++ L VE+F+ F++PG Sbjct: 420 GDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.063e-16 Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = -3 Query: 265 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKE-YGKLLKDFNKGLVNN----KDMEALKADVEKFASSFDMPGFKMSEMKY 540 GD SA+ PGG+R+GTPA+TSRG +E+DF ++ E+F V+L L+++ E G LKDF + L + ++ LK DVE+FA F GF+ + MKY Sbjct: 420 GDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMKY 516
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.593e-15 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = -3 Query: 259 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKE-YGKLLKDFNKGLVNN----KDMEALKADVEKFASSFDMPGFKMSEMKYKD 540 GD SA+ PGG+R+GTPA+TSRG LE+DF ++ +FF V + ++++ E G LKDF L ++ ++ L+ DVE++A F GF+ MKYK+ Sbjct: 420 GDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 259 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKE-YGKLLKDFNKGLVNN---KDMEALKADVEKFASSFDMPGFKMSEMKYKD 540 GD SA+ PGG+R+GTPA+TSRG +E+DF ++ FF V L ++I+ E G LKDF + ++ ++ L+ DVE++A F GF+ MKYK+ Sbjct: 420 GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAMESSAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.867e-14 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = -3 Query: 259 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKE-YGKLLKDFNKGLVNN---KDMEALKADVEKFASSFDMPGFKMSEMKYKD 540 GD SA+ PGG+R+GTPA+TSRG +E+DF ++ F V L ++I+ E G LKDF + ++ ++ L+ DVE++A F GF+ MKYK+ Sbjct: 420 GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVAAMQSSAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.170e-13 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 286 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYGKLLKDFNKGLVNNKDMEALKAD----VEKFASSFDMPGF 540 GD SA+ PGG+R+G PA+TSRG LE DF ++ F GV + LE++ + K L+DF L+ + + AD VE+FA +F MPGF Sbjct: 414 GDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKTTK-LQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGF 501
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 2.683e-12 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 286 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYGKLLKDFNKGLVNNKD----MEALKADVEKFASSFDMPGF 540 GD SA+ PGG+R+G PA+TSR E DF ++ +F GV + LE++ + K L+DF L+ + + + L+ VE+FA +F MPGF Sbjct: 414 GDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKTAK-LQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGF 501
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 286 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYGKLLKDFNKGLVNNKDMEALKAD----VEKFASSFDMPGF 540 GD SA+ PGG+R+G PA+TSR E DF ++ +F GV + LE++++ K L+DF L+ + + AD V++FA +F MPGF Sbjct: 414 GDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKTAK-LQDFKSFLLKDPETSQHLADLRRRVQQFARAFPMPGF 501 The following BLAST results are available for this feature:
BLAST of CF834983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834983 ID=CF834983; Name=CF834983; organism=Citrus sinensis; type=EST; length=545bpback to top |