CF834994

Overview
NameCF834994
Unique NameCF834994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4A7_RABIT (Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CYP4A7 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 41/140 (29.29%), Postives = 63/140 (45.00%), Query Frame = -2
Query:  305 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 724
            EE+   +G   ++       + Y    IKE LRLYP  P +  + +       G  +P G  + ++ + +  +P+VW NP  F P RF PG   H+           +PF  G R+C G   A+  L + +A  L  FEL
Sbjct:  350 EEIQGLLGDGASITWEHLDKMPYTTMCIKEALRLYPPVPGVGSKLSSPVTFPDGRSLPKGIIITLSIYGLHHNPKVWPNPEVFDPSRFAPGSARHSHA--------FLPFSGGSRNCIGKQFAMNELKVAVALTLVRFEL 481          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP3AA_MESAU (Lithocholate 6-beta-hydroxylase OS=Mesocricetus auratus GN=CYP3A10 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 43/142 (30.28%), Postives = 67/142 (47.18%), Query Frame = -2
Query:  299 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELAT 724
            +E+D  +  +  V       + YL  +I E LRLYP    L  R + +   ++G  +P G  +M+  + + RDP  W  P  F+PERF   +    D       +  +PFG+G R+C G   AL  + L +  +L  F L T
Sbjct:  333 DEIDSALPNKAPVTYDVLMGMEYLDMVINEGLRLYPIANRLE-RISKKAVEINGLFIPKGITVMVPTYPLHRDPEYWPEPEEFRPERFSKENKGSID------PYVYMPFGNGPRNCIGMRFALLSMKLAVVSVLQNFTLQT 467          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2CU_RABIT (Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=CYP2C30 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 45/154 (29.22%), Postives = 68/154 (44.16%), Query Frame = -2
Query:  263 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 724
            EE+++ +G++R+    D   + Y  A+I E  R     P   P    +D    GY +P GT ++ +   +  D + + NP  F P  FL   G     D        +PF  G+R+C G   A   L L L  +L  F L  PL  P D+  +P
Sbjct:  324 EEIERVIGRDRSPCMQDRSCMPYTDAVIHEIQRYIDMVPNNVPHAVTQDIQFRGYLIPKGTHILPSLTSVLYDEKEFPNPEKFDPGHFLDASGNFKKSDY------FLPFSIGKRACAGEGLARMELFLVLTTILQHFTL-KPLVDPKDIDPTP 470          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP254_MOUSE (Cytochrome P450 2C54 OS=Mus musculus GN=Cyp2c54 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 48/156 (30.77%), Postives = 68/156 (43.59%), Query Frame = -2
Query:  257 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGL 724
            EE++  +GK R     D  ++ Y  A+I E  R     P   P E   D     Y +P GT ++ +   + RD + + NP  F P  FL  +G     D        +PF +G+R C G   A   L L L  +L  F L  PL  P D+  +P L
Sbjct:  325 EEIEHVIGKHRRPCMQDRSHMPYTNAMIHEVQRFIDLVPNNLPHEVTCDIKFRNYFIPKGTTVITSLSSVLRDSKEFPNPEKFDPGHFLDENGKFKKSDY------FMPFSTGKRICAGEGLARMELFLFLTSILQNFNL-KPLVHPKDIDITPML 473          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CCD1D_DROME (Probable cytochrome P450 12d1 distal, mitochondrial OS=Drosophila melanogaster GN=Cyp12d1-d PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = -2
Query:  305 KERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFL--PGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 700
            K+  ++E + +++ YL+A+IKETLR YP G     R    D  +SGY VP GT +++ +  + ++   +  P  F PER+L  P  G    V      F  +PFG G R C G       +  T+A+L+  F +
Sbjct:  362 KDSLLNEENMKDMPYLRAVIKETLRYYPNG-FGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQV----SPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHV 490          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = -2
Query:  305 RAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 694
            RA   +D   + Y++  IKE LRLYP+ PL+A R+  E+  ++ + +PAG+ + I  +   R   ++ +P  FQPERF P +  +         +  +PF +G R C G   A+  +   ++RLL +++L
Sbjct:  351 RAPTMTDLHEMRYMEMCIKEALRLYPSVPLIA-RKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENR------HPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQL 473          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C11B2_MESAU (Cytochrome P450 11B2, mitochondrial OS=Mesocricetus auratus GN=CYP11B2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = -2
Query:  254 NLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDM--------SESPGLT 667
            +L  L+A++KETLRLYP G  L  R    D  +  YHVPAGT +++  + + R+P V+  P  + P+R+L  +G+          F+ + FG G R C G   A   + L L  +L +F + T   + V M        S SP LT
Sbjct:  361 DLPLLRAVLKETLRLYPVGGFLE-RILSSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPRPEHYLPQRWLERNGS----------FQHLTFGFGVRQCLGKRLAQVEMLLLLHHVLKSFRVETQEREDVRMVYRFVLAPSSSPLLT 495          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C11B1_PIG (Cytochrome P450 11B1, mitochondrial OS=Sus scrofa GN=CYP11B1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = -2
Query:  275 LVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDM 664
            L  L+A +KETLRLYP G  L  R    D  +  YH+PAGT + +  + + R+P V+  P  + P+R+L   G+       G +F  + FG G R C G   A   + L L  +L  F + T + + + M
Sbjct:  362 LPLLRAALKETLRLYPVGIFL-DRCVTSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPERYHPQRWLDNQGS-------GTRFPHLAFGFGMRQCLGRRLAQVEMLLLLHHVLKNFLVETLVQEDIKM 483          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 41/140 (29.29%), Postives = 63/140 (45.00%), Query Frame = -2
Query:  305 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 724
            EE+   +G   ++  +    + Y    IKE LRLYP  P +    +       G  +P G  ++++ + +  +P+VW NP  F P RF PG   H+           +PF  G R+C G   A+  L +  A  L  FEL
Sbjct:  349 EEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHA--------FLPFSGGSRNCIGKQFAMNELKVATALTLLRFEL 480          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2BB_CANFA (Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B11 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 46/154 (29.87%), Postives = 66/154 (42.86%), Query Frame = -2
Query:  263 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 724
            +E+DQ +G  R     D   + Y  A+I E  R     P+  P    +D    GY +P GT +         DP  +E P  F P+ FL  +GA    +        IPF  G+R C G   A   L L    +L  F +A+P+  P D+  +P
Sbjct:  326 KEIDQVIGPHRLPSLDDRAKMPYTDAVIHEIQRFGDLLPIGVPHMVTKDICFRGYIIPKGTEVFPILHSALNDPHYFEKPDVFNPDHFLDANGALKKNEA------FIPFSIGKRICLGEGIARMELFLFFTTILQNFSVASPM-APEDIDLTP 472          
The following BLAST results are available for this feature:
BLAST of CF834994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
CP4A7_RABIT1.242e-1229.29Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CY... [more]
CP3AA_MESAU1.242e-1230.28Lithocholate 6-beta-hydroxylase OS=Mesocricetus au... [more]
CP2CU_RABIT1.242e-1229.22Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=C... [more]
CP254_MOUSE1.242e-1230.77Cytochrome P450 2C54 OS=Mus musculus GN=Cyp2c54 PE... [more]
CCD1D_DROME1.242e-1232.84Probable cytochrome P450 12d1 distal, mitochondria... [more]
C4AA1_DROME1.242e-1231.54Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
C11B2_MESAU1.242e-1234.25Cytochrome P450 11B2, mitochondrial OS=Mesocricetu... [more]
C11B1_PIG1.242e-1233.85Cytochrome P450 11B1, mitochondrial OS=Sus scrofa ... [more]
CP4AB_HUMAN1.622e-1229.29Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP2BB_CANFA1.622e-1229.87Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834994 ID=CF834994; Name=CF834994; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTGAGGAAGAAAAAACTTAATTCATGCAAGCAAAGATCGCCC
ACCACTGCAGCAGTAATTTGTAGTAAGTGCATAACATTAAGAAATTAATT
TAACCAACACTACAGCTCGCTTTATTTAGTAAACAATAAGCACTTCGAGC
TTTGCTTGCTGGATTTAATAATTGCTCAAACTCAAAAGCCATAGGGGTTG
GCAGGGAGGAGGCGAGGAGAAAGGAGAACCTTCAATGGGGTGGCCTTAGG
TATGGTTAAGCCAGGAGACTCTGACATGTCAACAGGCTGATCCAATGGGG
TTGCTAGTTCAAATGCATGAAGGAGTCGAGCAAGCGTGAGGTGAAGGACC
TGGAGAGCAGATGATGCACCTGGGCAAGAACGTCGGCCAGAGCCAAAAGG
AATGAGTTCAAATTGTTGGCCCCTAACATCAACATCTGCATGGGCGCCAT
GGCCTGGGAGAAATCTCTCTGGTTGGAAGGCTGATGGATTTTCCCAAACC
CTTGGATCCCTTTGAATTTTCCAAGCATTTATCATCAAGCGGGTGCCAGC
CGGGACATGGTACCCAGAGACAGTGCAATCTTCCATTGCTTCACGTGGTG
CTAAGAGAGGACCCGCGGGATACAAGCGGAGGGTCTCTTTGATAATCGCT
TGGAGATACACTAGGTTTTGGGTGTCCGACTCATCAACTGCTCGTTCCTT
ACCAACTTGTTGGTCCAATTCTTCG
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