CF834994

Overview
NameCF834994
Unique NameCF834994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP27A_RAT (Sterol 26-hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = -2
Query:  305 DTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQ--FELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 676
            D  ++  L+A+IKETLRLYP  P  +     ++  ++G+  P  T+ ++  + + RDP V+  P +FQP R+L       + D  G Q  F  +PFG G RSC G   A   + L L+RL+  +E+
Sbjct:  381 DFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPESFQPHRWL----RKREDDNSGIQHPFGSVPFGYGVRSCLGRRIAELEMQLLLSRLIQKYEV 502          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C525A_DICDI (Probable cytochrome P450 525A1 OS=Dictyostelium discoideum GN=cyp525a1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 38/137 (27.74%), Postives = 74/137 (54.01%), Query Frame = -2
Query:  302 DESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYH---------VPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELA 685
            ++ D Q++ +L  +I ETLRL+P  P++      +D   SG +         +P+ T ++I+ + I RDP++W++P+ F P R+        +++    + + IPF SG R C G   ++    + +++L+  FEL+
Sbjct:  439 EDEDYQSIEFLDWVIYETLRLFPPAPMIGRTSKNDDILKSGNNNNNNNNNISIPSETLILISVYAIHRDPKLWKDPNIFNPYRW-------KNIENINNRSDFIPFSSGGRVCVGQKFSIVEARIIISKLILNFELS 568          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2L1_PANAR (Cytochrome P450 2L1 OS=Panulirus argus GN=CYP2L1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 50/173 (28.90%), Postives = 75/173 (43.35%), Query Frame = -2
Query:  212 ELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPG---LTIPKATPLKVLLSPR 721
            E+D  V +           L Y +A I E  R+    PL       +D  ++GY +P GT +M +     RDP  WE P+ F PE FL   G         ++  L+ F  GRR C G S A   L + L+ +L  F  + P  + +   + P     + PK  P +V++  R
Sbjct:  327 EIDAAVPRGTLPSLEHKDKLAYFEATIHEVHRIVSLVPLGVSHYTNQDTELAGYRLPKGTVVMSHLECCHRDPSYWEKPNEFYPEHFLDDQGKFV------KREHLVNFSVGRRVCVGESLARMELFVFLSAILQNFTFSAPKGEVLHTEKDPQQMLFSFPK--PYQVIIRER 491          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2A7_HUMAN (Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 46/169 (27.22%), Postives = 70/169 (41.42%), Query Frame = -2
Query:  218 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLTIPKATPLKVLLS 724
            EE+D+ +GK R     D   + Y++A+I E  R     P+   R   +D     + +P GT +      + RDP  + NP  F P+ FL   G     D        +PF  G+R+C G   A   L L    ++  F L +    P D+  SP   +    P    +S
Sbjct:  329 EEIDRVIGKNRQPKFEDRTKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVFPMLGSVLRDPSFFSNPQDFNPQHFLDDKGQFKKSDA------FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS-QSPKDIDVSPKHVVFATIPRNYTMS 490          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP24A_HUMAN (1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP24A1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = -2
Query:  233 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSG-YHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLTIPKATPL 724
            +E+   + + +     D +N+ YL+A +KE++RL P+ P       ++  TV G Y +P GT LM+N   +      +E+ S F+PER+L           +   F  +PFG G+R C G   A   LHL L  ++  +++    ++PV+M  S  L   +  P+
Sbjct:  354 KEIQSVLPENQVPRAEDLRNMPYLKACLKESMRLTPSVPFTT--RTLDKATVLGEYALPKGTVLMLNTQVLGSSEDNFEDSSQFRPERWL-------QEKEKINPFAHLPFGVGKRMCIGRRLAELQLHLALCWIVRKYDIQATDNEPVEMLHSGTLVPSRELPI 509          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 48/170 (28.24%), Postives = 79/170 (46.47%), Query Frame = -2
Query:  221 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMS-ESPGLTIP-KATPLKVLL 724
            EE+D     +          + YL  ++ ETLR++P    L  R   +D  + G  +P GT + +  + + RDP++W  P  F+PERF   +    +       +  +PFG+G R+C G   A+  + L + R+L  F      +  + +   S GL  P K   LKV+L
Sbjct:  333 EEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRL-DRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLWPEPEEFRPERFSKKNKDSIN------PYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFKPCKETQIPLKINSQGLIRPEKPIFLKVVL 495          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 47/172 (27.33%), Postives = 80/172 (46.51%), Query Frame = -2
Query:  212 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMS-ESPGLTIPKATPLKVLLSPR 724
            EE+D     +          + YL  ++ ETLR++P    L  R   +D  + G  +P GT +M+  + +  +P  W  P  F+PERF   +    +       +  +PFG+G R+C G   AL  + L L R+L  F      +  + +   + GLT P+  P+ + ++PR
Sbjct:   44 EEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLE-RLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKDGIN------PYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSFIPCKETQIPLKLYTQGLTQPE-QPVILKVAPR 207          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2F5_GORGO (Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=CYP2F5 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = -2
Query:  212 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP---GL-TIPKATPLKVLLSPR 724
            EE+D  VG+ R     D   + Y  A+I E  R     P+  P     D    G+ +P GT ++     +  DP  +  P  F PE FL  + +        +    +PF +GRR C G S A   L L L  +L +F L  PL  P D+  +P   GL  +P+  P ++ L PR
Sbjct:  326 EEIDLVVGRARLPALKDRAAMPYTDAVIHEVQRFADIIPMSLPHRVTRDTAFRGFLIPKGTDIITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFK------KSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSFSL-QPLGAPKDIDLTPLSSGLGNLPR--PFQLCLRPR 491          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP240_MOUSE (Cytochrome P450 2C40 OS=Mus musculus GN=Cyp2c40 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 46/154 (29.87%), Postives = 68/154 (44.16%), Query Frame = -2
Query:  263 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 724
            EE+D  +G+ R+    D  ++ Y  A++ E  R    GP     E   D     Y +  GT++M +   +  D   + NP  F P  FL  +G     D        +PF +G+R C G S A   L L L  +L  F+L  PL  P D+  +P
Sbjct:  325 EEIDNVIGRHRSPCMQDRNHMPYTNAMVHEVQRYIDLGPNGVVHEVTCDTKFRNYFILKGTQVMTSLTSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDY------FVPFSAGKRICVGESLARMELFLFLTTILQNFKL-KPLVDPKDIDMTP 471          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C5083_DICDI (Probable cytochrome P450 508A3 OS=Dictyostelium discoideum GN=cyp508a3-1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 45/172 (26.16%), Postives = 80/172 (46.51%), Query Frame = -2
Query:  209 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLTIPKATPLKVLLSPRL 724
            +E+   V     V  SD Q   Y  + IKETLR  P   +  PR   +D  +    +P   ++ IN + + R+   +ENP  F+P RF+     + D ++       +PF  G R+C G + AL  + L  + ++  F+ ++   + +D +E  G+T+       V +  R+
Sbjct:  318 DEIKLTVNGRNKVLLSDRQFTPYTVSFIKETLRYKPPSSVGVPRTTSQDIIIGDKFIPKDAQIFINYYGLSRNQDYFENPEQFEPSRFM-----NPDTNI-----AFLPFSIGTRNCVGQNFALDEMFLAFSNIILNFKFSSIDGKQIDETELYGVTLRCKNKFNVSIKKRI 479          
The following BLAST results are available for this feature:
BLAST of CF834994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
CP27A_RAT1.622e-1234.92Sterol 26-hydroxylase, mitochondrial OS=Rattus nor... [more]
C525A_DICDI1.622e-1227.74Probable cytochrome P450 525A1 OS=Dictyostelium di... [more]
CP2L1_PANAR2.119e-1228.90Cytochrome P450 2L1 OS=Panulirus argus GN=CYP2L1 P... [more]
CP2A7_HUMAN2.119e-1227.22Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2... [more]
CP24A_HUMAN2.119e-1229.091,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho... [more]
CP3AO_SHEEP2.767e-1228.24Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP3AJ_CAPAE2.767e-1227.33Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP2F5_GORGO2.767e-1230.86Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=... [more]
CP240_MOUSE2.767e-1229.87Cytochrome P450 2C40 OS=Mus musculus GN=Cyp2c40 PE... [more]
C5083_DICDI2.767e-1226.16Probable cytochrome P450 508A3 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834994 ID=CF834994; Name=CF834994; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTGAGGAAGAAAAAACTTAATTCATGCAAGCAAAGATCGCCC
ACCACTGCAGCAGTAATTTGTAGTAAGTGCATAACATTAAGAAATTAATT
TAACCAACACTACAGCTCGCTTTATTTAGTAAACAATAAGCACTTCGAGC
TTTGCTTGCTGGATTTAATAATTGCTCAAACTCAAAAGCCATAGGGGTTG
GCAGGGAGGAGGCGAGGAGAAAGGAGAACCTTCAATGGGGTGGCCTTAGG
TATGGTTAAGCCAGGAGACTCTGACATGTCAACAGGCTGATCCAATGGGG
TTGCTAGTTCAAATGCATGAAGGAGTCGAGCAAGCGTGAGGTGAAGGACC
TGGAGAGCAGATGATGCACCTGGGCAAGAACGTCGGCCAGAGCCAAAAGG
AATGAGTTCAAATTGTTGGCCCCTAACATCAACATCTGCATGGGCGCCAT
GGCCTGGGAGAAATCTCTCTGGTTGGAAGGCTGATGGATTTTCCCAAACC
CTTGGATCCCTTTGAATTTTCCAAGCATTTATCATCAAGCGGGTGCCAGC
CGGGACATGGTACCCAGAGACAGTGCAATCTTCCATTGCTTCACGTGGTG
CTAAGAGAGGACCCGCGGGATACAAGCGGAGGGTCTCTTTGATAATCGCT
TGGAGATACACTAGGTTTTGGGTGTCCGACTCATCAACTGCTCGTTCCTT
ACCAACTTGTTGGTCCAATTCTTCG
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