CF834994

Overview
NameCF834994
Unique NameCF834994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 39/140 (27.86%), Postives = 62/140 (44.29%), Query Frame = -2
Query:  305 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 724
            EE+   +G   ++       + Y    IKE LRLYP  P +    +       G  +P G ++ ++ + +  +P+VW NP  F P RF P    H+           +PF  G R+C G   A+  + + +A  L  FEL
Sbjct:  348 EEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAPDSPRHS--------HSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFEL 479          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2H2_CHICK (Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 52/175 (29.71%), Postives = 80/175 (45.71%), Query Frame = -2
Query:  212 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLT----IPKATPLKVLLSPR 724
            +E+D+ VG++R+   +D   L Y  A+I E  R     P+  PR  ++D  +  Y +P  T +      I +D + + NP  F P  FL  +G     +        +PF +G+R C G   A   L L L  +L  F L  P+    D+  SP +T    IP+  P +V   PR
Sbjct:  326 KEIDRVVGRDRSPCMADRSQLPYTDAVIHEIQRFIDFLPVNLPRAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHFLNANGTFRKSNY------FMPFSAGKRICAGEGLARMELFLFLTSILQNFSL-KPVKDRKDIDISPIVTSAANIPR--PYEVSFIPR 491          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2AD_HUMAN (Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 44/154 (28.57%), Postives = 64/154 (41.56%), Query Frame = -2
Query:  263 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 724
            EE+D+ +GK R     D   + Y +A+I E  R     P+       +D     + +P GT +      + RDPR + NP  F P+ FL   G     D        +PF  G+R C G   A   L L    ++  F   +P   P D+  SP
Sbjct:  329 EEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDA------FVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSP-QSPKDIDVSP 475          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP135_DROME (Probable cytochrome P450 313a5 OS=Drosophila melanogaster GN=Cyp313a5 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 41/136 (30.15%), Postives = 69/136 (50.74%), Query Frame = -2
Query:  299 GKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVW-ENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELAT 703
            G E     +D + LV L  ++ ET+RL PA PLL  + +      +G+++P G  LMI+ +   R+  +W    +AF P+ FLP +            +  +PF  G+++C G   +L    L LA++L  + L+T
Sbjct:  329 GGEFEASHADLEKLVKLDRVLHETMRLIPAVPLLIRQTSHSIQLSNGFYIPEGVTLMIDIFHTHRNKDIWGPQANAFNPDNFLPENKR------ARPPYSYLPFSKGKKTCLGWKLSLISAKLALAKILRNYMLST 458          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP11B_RANCA (Cytochrome P450 11B, mitochondrial OS=Rana catesbeiana GN=CYP11B PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 43/145 (29.66%), Postives = 72/145 (49.66%), Query Frame = -2
Query:  299 ELDQQVGKERAVDESDTQNLV----YLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELAT 721
            EL +++ K  A + +D   L+     L+  IKETLRLYP G +   R  ++D  +  YH+PAGT + +  + + R P ++++   + P R+L     +         F+ + FG G R C G   A   + L L  +L  F++ T
Sbjct:  356 ELREEIRKAEAQNPNDLNQLLNSLPLLKGAIKETLRLYPVG-ITVQRHLIKDIVLHNYHIPAGTLVQVGLYPMGRSPLLFQDALRYDPARWLKREDTN---------FKALAFGFGSRQCIGRRIAETEITLFLMHMLKNFQIDT 490          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C518B_DICDI (Probable cytochrome P450 518B1 OS=Dictyostelium discoideum GN=cyp518b1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = -2
Query:  254 AIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVW-ENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLT 649
            A +KE LRL PA P   PR + E   V G  +P GT L  + + I RD + W EN + F PERFL    +H++           P+G G+R C G++ +   L++ L  ++  F++ +   +P++   + G+T
Sbjct:  355 ATLKEVLRLIPATPFSVPRMSNEGFEVDGIKIPKGTYLFPSMYSIFRDEKYWGENANKFYPERFLT--DSHSN--------NYFPYGVGKRMCLGSNFSQHELYICLTNIVLNFKIKSIDGKPLNEIPNYGIT 477          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 43/147 (29.25%), Postives = 71/147 (48.30%), Query Frame = -2
Query:  284 ELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTV-SGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQP 721
            E+   +G   ++       + Y    IKETLRL P  P ++ RE  +  T+  G+ +PAG  ++++ W +  +P VW++P  F P RF   +        +      +PF SG R+C G   A+  L + +A  L  F +A  L +P
Sbjct:  343 EIRSILGDGSSITWEQLDEIPYTTMCIKETLRLIPPIPSIS-RELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKVFDPLRFTKENSE------QRHPCAFLPFSSGPRNCIGQQFAMLELKVAIALTLLRFRVAADLTRP 482          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4E1_DROME (Probable cytochrome P450 4e1 OS=Drosophila melanogaster GN=Cyp4e1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = -2
Query:  281 VGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPV 706
            +G++    E  T    +L   IKE  RLYP+ P +  R   +D  + G  VP GT L +    +  + RV+++P  FQPERF        D +  G  FE +PF +G R+C G   AL  +   +++++  FE+   LD+ V
Sbjct:  346 LGRDATFQEISTMK--HLDLFIKEAQRLYPSVPFIG-RFTEKDYVIDGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERF--------DREKPGP-FEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELV 475          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2H1_CHICK (Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 51/175 (29.14%), Postives = 79/175 (45.14%), Query Frame = -2
Query:  212 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLT----IPKATPLKVLLSPR 724
            +E+D+ VG++R+   +D   L Y  A+I E  R     PL  P   ++D  +  Y +P  T +      I +D + + NP  F P  FL  +G     D        +PF +G+R C G   A   + L L  +L  F L  P+    D+  SP +T    +P+  P +V   PR
Sbjct:  326 KEIDRVVGRDRSPCMADRSQLPYTDAVIHEIQRFIDFLPLNVPHAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHFLNANGTFRRSDY------FMPFSAGKRICAGEGLARMEIFLFLTSILQNFSL-KPVKDRKDIDISPIITSLANMPR--PYEVSFIPR 491          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2CG_RABIT (Cytochrome P450 2C16 OS=Oryctolagus cuniculus GN=CYP2C16 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 43/150 (28.67%), Postives = 66/150 (44.00%), Query Frame = -2
Query:  275 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDM 724
            EE+++ +G+ R+    D   + Y  A+I E  R     P   P     D     Y +P GT +M +   +  D + + NP  F P  FL   G     D        +PF +G+R C G + A   L L L  +L  F+L + L +P D+
Sbjct:  322 EEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLVPNNLPHTVTRDIKFRNYFIPKGTDIMTSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY------FMPFSAGKRICVGEALARMELFLFLTSILQNFKLQS-LVEPKDL 464          
The following BLAST results are available for this feature:
BLAST of CF834994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
CP4AA_RAT1.373e-1127.86Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP2H2_CHICK1.373e-1129.71Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=... [more]
CP2AD_HUMAN1.373e-1128.57Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE... [more]
CP135_DROME1.373e-1130.15Probable cytochrome P450 313a5 OS=Drosophila melan... [more]
CP11B_RANCA1.373e-1129.66Cytochrome P450 11B, mitochondrial OS=Rana catesbe... [more]
C518B_DICDI1.373e-1132.33Probable cytochrome P450 518B1 OS=Dictyostelium di... [more]
CP4X1_RAT1.794e-1129.25Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
CP4E1_DROME1.794e-1132.39Probable cytochrome P450 4e1 OS=Drosophila melanog... [more]
CP2H1_CHICK1.794e-1129.14Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=... [more]
CP2CG_RABIT1.794e-1128.67Cytochrome P450 2C16 OS=Oryctolagus cuniculus GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834994 ID=CF834994; Name=CF834994; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTGAGGAAGAAAAAACTTAATTCATGCAAGCAAAGATCGCCC
ACCACTGCAGCAGTAATTTGTAGTAAGTGCATAACATTAAGAAATTAATT
TAACCAACACTACAGCTCGCTTTATTTAGTAAACAATAAGCACTTCGAGC
TTTGCTTGCTGGATTTAATAATTGCTCAAACTCAAAAGCCATAGGGGTTG
GCAGGGAGGAGGCGAGGAGAAAGGAGAACCTTCAATGGGGTGGCCTTAGG
TATGGTTAAGCCAGGAGACTCTGACATGTCAACAGGCTGATCCAATGGGG
TTGCTAGTTCAAATGCATGAAGGAGTCGAGCAAGCGTGAGGTGAAGGACC
TGGAGAGCAGATGATGCACCTGGGCAAGAACGTCGGCCAGAGCCAAAAGG
AATGAGTTCAAATTGTTGGCCCCTAACATCAACATCTGCATGGGCGCCAT
GGCCTGGGAGAAATCTCTCTGGTTGGAAGGCTGATGGATTTTCCCAAACC
CTTGGATCCCTTTGAATTTTCCAAGCATTTATCATCAAGCGGGTGCCAGC
CGGGACATGGTACCCAGAGACAGTGCAATCTTCCATTGCTTCACGTGGTG
CTAAGAGAGGACCCGCGGGATACAAGCGGAGGGTCTCTTTGATAATCGCT
TGGAGATACACTAGGTTTTGGGTGTCCGACTCATCAACTGCTCGTTCCTT
ACCAACTTGTTGGTCCAATTCTTCG
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