CF834995

Overview
NameCF834995
Unique NameCF834995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 45/175 (25.71%), Postives = 78/175 (44.57%), Query Frame = 1
Query:  148 KRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLTIPKATPLKVLLSPR 672
            ++  EE+D  +  +          + YL  ++ ETLR++P    L  R   +D  ++G  +P G  +MI ++ +  DP+ W  P  F PERF   +  + D       +   PFGSG R+C G   AL  + L + R+L  F      +  + +    G  +    P+ + +  R
Sbjct:  329 QKLQEEIDTVLPNKAPPTYDTVLQMEYLDMVVNETLRIFPIAMRLE-RVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEPEKFLPERFSKKNNDNID------PYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFKPCKETQIPLKLRLGGLLQTEKPIVLKIESR 496          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2CG_RABIT (Cytochrome P450 2C16 OS=Oryctolagus cuniculus GN=CYP2C16 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 46/167 (27.54%), Postives = 74/167 (44.31%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDM 609
            +++ LLL +     +  EE+++ +G+ R+    D   + Y  A+I E  R     P   P     D     Y +P GT +M +   +  D + + NP  F P  FL   G     D        +PF +G+R C G + A   L L L  +L  F+L + L +P D+
Sbjct:  305 YSLLLLLKHPEVADKVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLVPNNLPHTVTRDIKFRNYFIPKGTDIMTSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY------FMPFSAGKRICVGEALARMELFLFLTSILQNFKLQS-LVEPKDL 464          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2C5_RABIT (Cytochrome P450 2C5 OS=Oryctolagus cuniculus GN=CYP2C5 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDM 609
            +++ LLL +     R  EE+++ +G+ R+    D   + Y  A+I E  R     P   P     D     Y +P GT ++ +   +  D + + NP  F P  FL   G     D        +PF +G+R C G   A   L L L  +L  F+L + L +P D+
Sbjct:  305 YSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY------FMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQS-LVEPKDL 464          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2B1_RAT (Cytochrome P450 2B1 OS=Rattus norvegicus GN=Cyp2b1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 46/167 (27.54%), Postives = 74/167 (44.31%), Query Frame = 1
Query:  121 LLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 621
            L+L   H  ++  +E+DQ +G  R     D   + Y  A+I E  R     P+  P    +D    GY +P  T +         DP+ +++P +F PE FL  +GA    +        +PF +G+R C G   A   L L    +L  F +++ L  P D+  +P
Sbjct:  313 LMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRSKMPYTDAVIHEIQRFSDLVPIGVPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPQYFDHPDSFNPEHFLDANGALKKSEA------FMPFSTGKRICLGEGIARNELFLFFTTILQNFSVSSHL-APKDIDLTP 472          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: C11B2_HUMAN (Cytochrome P450 11B2, mitochondrial OS=Homo sapiens GN=CYP11B2 PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 1
Query:  211 TQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDM 609
            T  L  L+A +KETLRLYP G L   R    D  +  YH+PAGT + +  + + R+  ++  P  + P+R+L       D+   G+ F  +PFG G R C G   A   + L L  +L  F + T   + + M
Sbjct:  359 TTELPLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL-------DIRGSGRNFHHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHFLVETLTQEDIKM 483          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: C11B1_BOVIN (Cytochrome P450 11B1, mitochondrial OS=Bos taurus GN=CYP11B1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 1
Query:  187 ERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDM 609
            +RA+ E     L  L+A +KETLRLYP G  L  RE   D  +  YH+PAGT + +  + + R+P V+  P ++ P+R+L   G+       G +F  + FG G R C G   A   + L L  +L  F + T   + + M
Sbjct:  356 QRAITE-----LPLLRAALKETLRLYPVGITLE-REVSSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPESYHPQRWLDRQGS-------GSRFPHLAFGFGVRQCLGRRVAEVEMLLLLHHVLKNFLVETLEQEDIKM 483          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP4AM_HUMAN (Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 46/169 (27.22%), Postives = 73/169 (43.20%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFE-LATPLDQPVDMS 612
            W +  L  +    +R  EE+   +G   ++  +    + Y    IKE LRLYP  P +    +       G  +P G  ++++ + +  +P+VW N   F P RF PG   H+           +PF  G R+C G   A+  L +  A  L  FE L  P   P+ M+
Sbjct:  332 WILYALATHPKHQERCREEIHGLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNLEVFDPSRFAPGSAQHSHA--------FLPFSGGSRNCIGKQFAMNQLKVARALTLLRFELLPDPTRIPIPMA 492          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 1
Query:  124 LLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMS-ESPGLTIPKATPLKVLLSPR 672
            L  + H  ++  EE+D     +          + YL  ++ ETLR++P    L  R   +D  + G  +P GT +++  + +  +P +W  P  F+PERF   +    +       +  +PFG+G R+C G   A+  + L L R+L  F      +  + +   + GLT P+  P+ + + PR
Sbjct:  321 LTTHPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLE-RVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPEEFRPERFSKNNKDSIN------PYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFKPCKETQIPLKLYTQGLTQPE-QPVILKVVPR 496          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP305_DROME (Probable cytochrome P450 305a1 OS=Drosophila melanogaster GN=Cyp305a1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 46/148 (31.08%), Postives = 71/148 (47.97%), Query Frame = 1
Query:  226 YLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFE---LIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLTI-PKATPLKV 657
            Y+ A I E  R +   P+  PR A+    + GY +P    ++I+   +  D   W++P  F+PERF         +D  G+ F+    +PFG GRR C G + A   +   L R++  F +  P  +   M   PG+T+ PK  P KV
Sbjct:  362 YMDAFIMEVQRFFHITPITGPRRALWATKLGGYDIPKNATILISLRSVHLDKEHWKDPLEFRPERF---------IDSAGKCFKDEYFMPFGMGRRRCLGDALARACIFSFLVRIVQHFSVVLPAGESPSMVLLPGITLTPK--PYKV 498          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2M1_ONCMY (Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2m1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 43/151 (28.48%), Postives = 67/151 (44.37%), Query Frame = 1
Query:  121 LLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAF 573
            +++   H  +   +E+D+ +G  R     D   + Y  A+I E  R     P   P + M D     YH+P GT ++     +  DP++++NP  F PE FL  +G     D          FG G+R+CPG + A   L L    +L  F
Sbjct:  319 MMIKYPHIQESVQKEIDEVIGS-RVPTVDDRVKMPYTDAVIHEVQRYMDLSPTSVPHKVMRDTEFYNYHIPEGTMVLPLLSSVLVDPKLFKNPDEFDPENFLDENGVFKKND------GFFAFGVGKRACPGEALARVELFLFFTSVLQRF 462          
The following BLAST results are available for this feature:
BLAST of CF834995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP3A8_MACFA4.303e-1325.71Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP2CG_RABIT4.303e-1327.54Cytochrome P450 2C16 OS=Oryctolagus cuniculus GN=C... [more]
CP2C5_RABIT4.303e-1327.54Cytochrome P450 2C5 OS=Oryctolagus cuniculus GN=CY... [more]
CP2B1_RAT4.303e-1327.54Cytochrome P450 2B1 OS=Rattus norvegicus GN=Cyp2b1... [more]
C11B2_HUMAN4.303e-1333.08Cytochrome P450 11B2, mitochondrial OS=Homo sapien... [more]
C11B1_BOVIN4.303e-1334.04Cytochrome P450 11B1, mitochondrial OS=Bos taurus ... [more]
CP4AM_HUMAN5.620e-1327.22Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE... [more]
CP3AS_BOVIN5.620e-1325.54Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP305_DROME5.620e-1331.08Probable cytochrome P450 305a1 OS=Drosophila melan... [more]
CP2M1_ONCMY5.620e-1328.48Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834995 ID=CF834995; Name=CF834995; organism=Citrus sinensis; type=EST; length=727bp
CGATATCGGACCCTAAAATTTCCTGGTCGTGATGCTGATACCATCAACAA
CCCTACATGCTTGGCACTCATCCTTGGTGGCAGTGATACTACATCAGGCA
CCCTGACATGGGCCATTTCTTTACTCTTGAACAACCGCCATGCGTTGAAG
AGGGCACACGAAGAATTGGACCAACAAGTTGGTAAGGAACGAGCAGTTGA
TGAGTCGGACACCCAAAACCTAGTGTATCTCCAAGCGATTATCAAAGAGA
CCCTCCGCTTGTATCCCGCGGGTCCTCTCTTAGCACCACGTGAAGCAATG
GAAGATTGCACTGTCTCTGGGTACCATGTCCCGGCTGGCACCCGCTTGAT
GATAAATGCTTGGAAAATTCAAAGGGATCCAAGGGTTTGGGAAAATCCAT
CAGCCTTCCAACCAGAGAGATTTCTCCCAGGCCATGGCGCCCATGCAGAT
GTTGATGTTAGGGGCCAACAATTTGAACTCATTCCTTTTGGCTCTGGCCG
ACGTTCTTGCCCAGGTGCATCATCTGCTCTCCAGGTCCTTCACCTCACGC
TTGCTCGACTCCTTCATGCATTTGAACTAGCAACCCCATTGGATCAGCCT
GTTGACATGTCAGAGTCTCCTGGCTTAACCATACCTAAGGCCACCCCATT
GAAGGTTCTCCTTTCTCCTCGCCTCCTCCCTGCCAACCCCTATGGCTTTT
GAGTTTGAGCAATTATTAAATCCAGCA
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