CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.137e-22
Identity = 68/184 (36.96%), Postives = 98/184 (53.26%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-----AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXLVDPDLQNNYVE----------------AEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P I+HRDVK+ NILLD E +  V DFGLAK +  +D    +      V G+ G+IAPEY  T K +EK+DV+ +G++LLELITG+R  D +   N D V   ++              ++ D   NY +                 E+E+++ VALLCT   P++RP M +VV +L+
Sbjct:  804 YLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELLK 987          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22
Identity = 64/166 (38.55%), Postives = 96/166 (57.83%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLV-DPDLQN--NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL     P I+HRDVK  NILLD ++EA++ DFGLAKLM     +    + V G+ G+IAPEY  T   +EK+DV+ YG++LLE+++G+ A +       D + +++WV            V D  LQ   + +  E+ Q + +A+ C   SP++RP M EVV +L
Sbjct:  887 YLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVE---PQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLL 1049          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22
Identity = 59/162 (36.42%), Postives = 90/162 (55.56%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL       IIHRD+K  NILLDE   A V DFG +KL       +TT V+GT+G++ PEY +T   +EK+DV+ +G++L+ELI+GQ+A    R   +    L+ +            ++D  + N   + E+ +  +VA+ CT+    +RP+M EV   LE
Sbjct:  220 YLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFER--PETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELE 379          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = -2
Query:  275 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLA 775
            YL      +IIHRD+KA+NILLDEE    + DFG+A+L D   T    T  + GT G++APEY+  G+ S KTDV+ +G+++LE+I+G++    +   +  D++   W                   ++Y    + + I + LLC Q    +RP M+ VV ML+G  +A
Sbjct:  456 YLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDGHTIA 624          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22
Identity = 59/165 (35.76%), Postives = 98/165 (59.39%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR---AFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL      KIIHRD+KA+NILLD +    + DFG+A++     T   TA V GT G+++PEY++ G+ S K+DV+ +G+++LE+I+G++    + +  L N+    L+ +V           L+DP ++ +    EV + + + LLC Q +P DRP MS + ++L
Sbjct:  471 YLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNN----LVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVL 631          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22
Identity = 58/163 (35.58%), Postives = 91/163 (55.83%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL      KIIHRD+KA+NILLD +    + DFGLA +   + T   T  + GT  +++PEY   G+ S K+D++ +G+++LE+I+G++   + ++        L+ +            LVDP    NY   EV + I +ALLC Q +P DRP +S ++ ML
Sbjct:  462 YLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILML 624          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.939e-22
Identity = 57/162 (35.19%), Postives = 92/162 (56.79%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL       IIHRD+K ANILLD+   A V DFG ++L+      +TT V+GT+G++ PEY +TG  +EK+DV+ +G++L+EL++GQ+A    R     +  L+              ++D  + N   + E+++  ++A  CT+    +RP+M EV   LE
Sbjct:  516 YLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKN--LVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMKEVAAELE 675          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.939e-22
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL       +IHRDVK++NILLD    A V DFG +K    + D++V+  VRGT G++ PEY  T + SEK+DVF +G++LLE+++G+   ++ R     +  L++W            +VDP ++  Y    + ++++VAL C +     RP M ++VR LE
Sbjct:  708 YLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKR--PRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 868          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.939e-22
Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = -2
Query:  278 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 775
            YL       IIHRD+KA+NILLD +    + DFG+A+      T   T  V GT G++ PEY++ G+ S K+DV+ +G+++LE++ G++     ++ +D    L+  V           L+DP ++ +Y   EV + I + +LC Q +P DRP+MS + +ML    +
Sbjct:  451 YLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQM-DDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQETPADRPEMSTIFQMLTNSSI 616          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.532e-22
Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = -2
Query:  290 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLV-DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 757
            + ++I+RD K +NILLD E+ A + DFGLAK     D +HV+T V GT G+ APEYL+TG  + K+DV+ +G++LLEL++G+RA D  R + + +  L++W             V D  LQ+ Y   E  ++  ++L C       RP MSEVV  LE
Sbjct:  196 ETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERN--LVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
HSL2_ARATH1.137e-2236.96LRR receptor-like serine/threonine-protein kinase ... [more]
Y1341_ARATH1.485e-2238.55Probable LRR receptor-like serine/threonine-protei... [more]
WAKLS_ARATH1.485e-2236.42Putative wall-associated receptor kinase-like 16 O... [more]
CRK26_ARATH1.485e-2234.91Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK17_ARATH1.485e-2235.76Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK11_ARATH1.485e-2235.58Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
WAK2_ARATH1.939e-2235.19Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
NORK_PEA1.939e-2236.20Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK31_ARATH1.939e-2234.13Putative cysteine-rich receptor-like protein kinas... [more]
APK1A_ARATH2.532e-2240.51Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
back to top