CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22
Identity = 55/172 (31.98%), Postives = 98/172 (56.98%), Query Frame = -2
Query:  260 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDE 775
            YL    +P IIHRDVK++NILLD    A V DFGL++  +   THV++  +GT+G++ PEY ++ + +EK+DV+ +G++L EL++G++           ++ ++ W            ++DP + +N     V ++ +VA  C +    +RP+M EV+  ++     ER +E
Sbjct:  718 YLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFG--PELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRIERGNE 887          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22
Identity = 62/167 (37.13%), Postives = 95/167 (56.89%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV-XXXXXXXXXXXLVDPDLQNNYVEA----EVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL    DP I+HRD+K  NILLD + E  + DFG+AKL+D   T + +  V+GTIG++APE   T   S ++DV+ YG++LLELIT ++A D +     D   ++ WV            +VDP L +  +++    +V + + +AL C +     RP M +VV+ L
Sbjct:  929 YLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETD---IVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVVKQL 1092          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22
Identity = 59/164 (35.98%), Postives = 101/164 (61.59%), Query Frame = -2
Query:  293 HGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KDTHVTT----AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 763
            H   KIIHRD+KA+NILLD +++  + DFGLAK      KD   ++    ++ GT+G++APEY+S G+ S K D + +G+++LE+ +G   F   +  +D+ +  L+  V           ++D D+  +  + E+++++Q+ LLCTQ SP  RP MS+V++M+
Sbjct:  445 HETCKIIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSG---FRNNKFRSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMV 605          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22
Identity = 54/157 (34.39%), Postives = 94/157 (59.87%), Query Frame = -2
Query:  290 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDL-QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 754
            P IIHRD+K++N+LLD++F A V DFG+A+L+   DTH++ + + GT G++ PEY  + + + K DV+ YG++LLEL++G++  D      D++  L+ W            ++DP+L  +   + E+   +++A  C    P  RP M +V+ M +
Sbjct:  979 PHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNN--LVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFK 1133          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.641e-22
Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL +   P ++HRDVK  NILL+E + A + DFGL++      ++HV+T V GT G++ PEY  T   SEK+DV+ +G++LLE++T Q   D  R    +   + +WV           ++DP L  +Y      +++++AL C   S   RP M+ VV  L
Sbjct:  677 YLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTR----ERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTEL 834          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.641e-22
Identity = 66/173 (38.15%), Postives = 99/173 (57.23%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV------XXXXXXXXXXXLVDP----DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P I+HRD+K  NIL+D + E  +GDFGLA+L+D  D+ V+TA V GT G+IAPE         ++DV+ YG++LLEL+T +RA D +   + D   ++ WV                 +VDP    +L ++ +  +V Q+ ++AL CTQ  P  RP M + V++LE
Sbjct:  941 YLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLD--DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTD---IVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLLE 1108          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.641e-22
Identity = 63/164 (38.41%), Postives = 92/164 (56.10%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR--AFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL       IIHRD+KA+NILLD +    + DFG+A++     T   T+ + GT G++APEY   G+ S K+DV+ +G+++LE+I+G++  +FD +  A D    LL              LVDP + NN   +EV + I + LLC Q  P  RP +S V  ML
Sbjct:  465 YLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQD----LLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMML 624          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.641e-22
Identity = 63/160 (39.38%), Postives = 92/160 (57.50%), Query Frame = -2
Query:  290 HGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLV-DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 763
            + +  +I+RD K +NILLD E+ A + DFGLAK     D +HV+T + GT G+ APEYL+TG  + K+DV+ YG++LLE+++G+RA D  R   +    L++W             V D  LQ+ Y   E  ++  +AL C       RP M+EVV  LE
Sbjct:  195 NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQ--KLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLE 352          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL +   P ++HRDVK  NILL+E   A + DFGL++      + HV+T V GT G++ PEY  T   SEK+DV+ +G++LLE++T Q   D  R    +   + DWV           +VDP L  +Y      +++++AL C   S   RP M+ VV  L
Sbjct:  695 YLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTR----ERPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMEL 852          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 58/163 (35.58%), Postives = 88/163 (53.99%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL    +  IIHRDVK  NILLDE F A + DFGL+K     D THV+TAV+G+ G++ PEY    + +EK+DV+ +G++L E +  +   +       D + L +W            ++D +L+ NY    +E+  ++A  C      +RP M EV+  LE
Sbjct:  631 YLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVIN--PTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLE 791          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
Y1677_ARATH4.319e-2231.98Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_IPONI4.319e-2237.13Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
CRK43_ARATH4.319e-2235.98Putative cysteine-rich receptor-like protein kinas... [more]
BRL3_ARATH4.319e-2234.39Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5188_ARATH5.641e-2235.80Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH5.641e-2238.15Leucine-rich repeat receptor-like protein kinase P... [more]
CRK8_ARATH5.641e-2238.41Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
APK1B_ARATH5.641e-2239.38Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y1518_ARATH7.368e-2237.04Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH9.623e-2235.58Probable receptor-like protein kinase At1g30570 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
back to top