CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.540e-11
Identity = 51/151 (33.77%), Postives = 74/151 (49.01%), Query Frame = -2
Query:  293 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 745
            IHRD+KAANIL+D+   A VGDFGL++++D  +    TAV GT    +PE L     +  +DV+ YG+ML EL TG   F    L     V L   V            V      N++ + ++        C   SP  RP M+++++ L
Sbjct: 1497 IHRDIKAANILVDKNNNAKVGDFGLSRVID--NNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATGDEPF----LEIQSIVELARSVCDKKLKPKISSSVP-----NFISSLIKD-------CLHNSPKKRPTMNQIIQKL 1629          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CHK1_YEAST (Serine/threonine-protein kinase CHK1 OS=Saccharomyces cerevisiae GN=CHK1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = -2
Query:  461 HGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--THVTTAVRGTIGHIAPE--YLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLD 763
            H +  + HRD+K  NILLD+     + DFGLA     KD    V+   RG+  ++APE  Y   G  +++TD++  GI+L  L+TGQ  ++L  L N+D V  ++
Sbjct:  133 HVECGVAHRDIKPENILLDKNGNLKLADFGLASQFRRKDGTLRVSMDQRGSPPYMAPEVLYSEEGYYADRTDIWSIGILLFVLLTGQTPWELPSLENEDFVFFIE 237          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 52/178 (29.21%), Postives = 85/178 (47.75%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAK---------LMDYKDTHVTTA------VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF-DLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL ++G   I+HRDVK AN+LLDE+F   + DFGLA+         L +++ +   T       + GT+ ++APE L     +EK D++ +GI++ EL+TG   + D    A    V+ +++             + P L    +    + L+ +   C +  P  RP    VV  LE
Sbjct:  139 YLHNNG---IVHRDVKPANVLLDEKFFPYLADFGLAEYKKNLREVNLQNWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDMYTEKADIYSFGILINELLTGVVPYTDRRAEAQAHTVLEMNYTEQQLTVAIVSSGLRPALAEIGLHLP-KSLLSLIQNCWESDPSKRPSSDNVVLELE 312          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: PK1_STRTO (Serine/threonine-protein kinase PK-1 OS=Streptomyces toyocaensis GN=spk1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = -2
Query:  503 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 745
            +HRD+K  N+L+ ++    V DFGL + +D   T+ T  V GT+ ++APE +  G +  + DV+  GI+L E++TG++  D
Sbjct:  138 VHRDMKPENVLIGDDGRVKVADFGLVRAVD-SVTNTTGTVLGTVSYLAPEQIEHGTADPRVDVYACGILLYEMLTGEKPHD 217          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
Y1199_DICDI1.540e-1133.77Probable serine/threonine-protein kinase DDB_G0282... [more]
CHK1_YEAST5.851e-1137.14Serine/threonine-protein kinase CHK1 OS=Saccharomy... [more]
P2C31_ARATH7.642e-1129.21Protein kinase and PP2C-like domain-containing pro... [more]
PK1_STRTO9.981e-1137.04Serine/threonine-protein kinase PK-1 OS=Streptomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
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