CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835011_ssr475 microsatellite CF835011_ssr475:475..486. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24
Identity = 64/160 (40.00%), Postives = 96/160 (60.00%), Query Frame = -2
Query:  293 HGDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV-XXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 763
            H DP K+I+RD+KA+NILLD +F A + DFGLA+     + ++V+T V GT G+ APEY+STG  + ++DV+ +G++LLEL+ G++A D  R A + +  L+DW             +VD  L + Y      +L  +A+ C    P  RP M +VVR L
Sbjct:  187 HSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQN--LVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL 344          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24
Identity = 61/163 (37.42%), Postives = 93/163 (57.06%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P I+HRDVK++NILLD++ +A + DFGL++     D +HV+T V GT G++  EY  T + SEK+DV+ +G++LLE+IT +   D     N D   + +WV           ++DP LQ  Y      + +++A+ C   S + RP MS VV  L+
Sbjct:  679 YLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVID----HNRDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELK 837          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24
Identity = 60/168 (35.71%), Postives = 95/168 (56.55%), Query Frame = -2
Query:  275 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLA 775
            YL       IIHRD+KA NILL ++  A + DFG+A++     T   T  + GT G+++PEY   G+ S K+DV+ +G+++LE+I+G++  ++ ++       L+ +            LVDP  ++NY   EV + I +ALLC Q    DRP MS +V+ML    +A
Sbjct:  463 YLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSIA 630          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.615e-24
Identity = 60/163 (36.81%), Postives = 93/163 (57.06%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P +IHRD+K+ NILLD  F+A +GDFGL++      +THV+T V G+ G++ PEY  T   +EK+DVF +G++LLE+IT Q   D  R    +   + +WV           +VDP +  +Y  + + + +++A+ C   S   RP MS+V   L+
Sbjct:  703 YLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTR----EKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ 861          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.027e-24
Identity = 59/170 (34.71%), Postives = 95/170 (55.88%), Query Frame = -2
Query:  284 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQN------NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 775
            YL     P I HRD+K  NILLD +  A V DFGLAK     ++H+TT V GT G++APEY   G+ +EK+DV+ +G+++LE++ G++A DL+   + +  ++ DW             ++  L        +  +  +E+ +QV +LC       RP + + ++MLEGD
Sbjct:  413 YLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLEGD 582          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.027e-24
Identity = 62/163 (38.04%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL       IIHRD+KA NILLD++    + DFG+A++     T  +T  V GT G+++PEY   G+ S K+DV+ +G+++LE+I+G +   L ++  D+ V  L+ +            LVDP   +NY  +E+ + I +ALLC Q    DRP MS +V+ML
Sbjct:  438 YLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQM--DESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQML 598          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.872e-24
Identity = 59/156 (37.82%), Postives = 92/156 (58.97%), Query Frame = -2
Query:  290 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLV-DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 751
            ++I+RD KA+NILLD  ++A + DFGLAKL    + +HVTT + GT G+ APEY++TG    K+DVF +G++LLE++TG  A +  R    +   L+DW+            + D  ++  Y      ++ ++ L C +  P +RP M EVV +LE
Sbjct:  213 EVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQES--LVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLE 366          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.872e-24
Identity = 64/168 (38.10%), Postives = 94/168 (55.95%), Query Frame = -2
Query:  284 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY---KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNY-VEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 775
            YL +    KI+HRD+KA+N+LLD+     + DFG+AKL D      T  T+ V GT G++APEY  +G+ S KTDVF +G+++LE+I G++  +      D  + LL +V           +VDP L     V  E+ + I + LLC Q +   RP M+ VV ML  +
Sbjct:  456 YLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKK--NNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNAN 621          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.028e-23
Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = -2
Query:  293 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQ---LIQVALLCTQGSPMDRPKMSEVVRML 754
            P I+HRDVKA+N+LLD+   A V DFGLA+L++  D+HV+T + GTIG++APEY  T +++ + DV+ YG++ +EL TG+RA D        +  L++W                 L         EQ   L+++ + CT   P  RP M EV+ ML
Sbjct:  935 PSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVD------GGEECLVEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAML 1085          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.028e-23
Identity = 60/170 (35.29%), Postives = 99/170 (58.24%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-----HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQN--NYVEAE-VEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P I HRDVK++NILLDE+  A V DFGL++L+D  +T     H+ T  +GT+G++ PEY    + ++K+DV+ +G++LLE++T ++A D  R   ++DV L+ ++            +DP L+   N ++ + ++QL  +A  C      +RP M EV   +E
Sbjct:  477 YLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTR--EEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIE 644          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
Y3545_ARATH3.534e-2440.00Probable receptor-like protein kinase At3g55450 OS... [more]
Y1756_ARATH3.534e-2437.42Probable LRR receptor-like serine/threonine-protei... [more]
CRK4_ARATH3.534e-2435.71Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
Y4245_ARATH4.615e-2436.81Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH6.027e-2434.71Probable receptor-like protein kinase At1g11050 OS... [more]
CRK19_ARATH6.027e-2438.04Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CX32_ARATH7.872e-2437.82Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK41_ARATH7.872e-2438.10Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y1743_ARATH1.028e-2338.22Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH1.028e-2335.29Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
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