CF835017

Overview
NameCF835017
Unique NameCF835017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.872e-20
Identity = 57/136 (41.91%), Postives = 77/136 (56.62%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKV 461
            G I +ELF + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G KF DE +   KH+  G++SMAN GP TNGSQFF+   +   LD K+ VFG+V++G++ +  +EK+
Sbjct:   10 GDIKIELFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPLGTGKGGT-SIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20
Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKV 461
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G KF DE +   KH   G++SMAN GP TNGSQFF+   +   LD K+ VFG+V++G++ +  +EK+
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20
Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKV 461
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G KF DE +   KH   G++SMAN GP TNGSQFF+   +   LD K+ VFG+V++G++ +  +EK+
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPTGTGRGG-NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20
Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEK 458
            G I +ELF +  PRTAENF ALC        SG+   Y+G+ FHR I GFM Q            +SI+G  F+DE     +    G+++MANAGP TN SQFF+  A+   LDGK+ +FG+V++GM+ + ++EK
Sbjct:   10 GDIKIELFCESVPRTAENFLALCA-------SGQ---YDGTLFHRNIRGFMIQGGDPTGTGKGG-QSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSMEK 133          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19
Identity = 55/136 (40.44%), Postives = 75/136 (55.15%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKV 461
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+  KF DE +   KH   G++SMAN GP TNGSQFF+   +   LD K+ VFG+V++G++ +  +EK+
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19
Identity = 61/143 (42.66%), Postives = 76/143 (53.15%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK---KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 476
            G + +EL  D  P+T  NF  L        K+GK   Y+   FHR+IPGFM Q            ES +G  F DE+  K   KH   G+LSMAN+GP TNGSQFF     T  LDGKH VFG++V G + +  IE+V    G
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIERVNVRPG 454          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18
Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKV 461
            G + +EL  D+ PR  ENF  LC  E+G        +Y G +FHR I  FM Q            ESI+G  F DE N    H+G G++SMAN+GP TNGSQFFV       L+ KH VFG VV G+  + A+E V
Sbjct:  353 GDLNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENV 477          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIB_STRCH (Peptidyl-prolyl cis-trans isomerase B OS=Streptomyces chrysomallus GN=cypB PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18
Identity = 62/154 (40.26%), Postives = 82/154 (53.25%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKG-----VGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKK-HTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV--VEGMDVVKAIEKVGSSSGRTNKPV 494
            G I + L  +  P+T  NF  L TG++       G+      Y+G+ FHRVI GFM Q                G KFADE   +   T P +L+MANAGPGTNGSQFF+  + T WL GKH +FG+V    G  VV AI     ++ RT++P+
Sbjct:   14 GDIEIRLLPNHAPKTVRNFVELATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGDPLGNGTGGP----GYKFADEFHPELGFTQPYLLAMANAGPGTNGSQFFLTVSPTAWLTGKHTIFGEVSGEAGRKVVDAIAAT-PTNPRTDRPL 162          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18
Identity = 62/152 (40.79%), Postives = 81/152 (53.29%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXX----ESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVV--EGMDVVKAIEKVGSSSGRTNKP 491
            G I +E++ +  P+TAENF ALC    G G      +Y+ S FHRVIP FM Q                 SI+G  F DE     +H   G+LSMAN GPGTNGSQFF+   +   LDG + VFG+V+  EG+  +  +E V     R N+P
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSG------YYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAV--EVDRKNRP 149          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.288e-18
Identity = 64/157 (40.76%), Postives = 83/157 (52.87%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGK---SGKPL--HYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVV--EGMDVVKAIEKVGS-SSGRTNKPVVI 500
            G I + LF +  P+T  NF  L  G K       SG P    Y+G+ FHRVI GFM Q                G KFADE   + +   P +L+MANAGPGTNGSQFF+   +T  L+ +H +FG+V+  E   VV+AI K  +  + R   PVVI
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVI 176          
The following BLAST results are available for this feature:
BLAST of CF835017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPIL3_CHICK1.872e-2041.91Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_RAT4.170e-2041.18Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN4.170e-2041.18Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL3_CRYNE5.447e-2042.96Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL3_MOUSE2.070e-1940.44Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL2_CRYNE4.611e-1942.66Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL2_ARATH1.027e-1843.38Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIB_STRCH1.027e-1840.26Peptidyl-prolyl cis-trans isomerase B OS=Streptomy... [more]
PPIL3_GIBZE1.342e-1840.79Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIA_MYCTU2.288e-1840.76Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835017 ID=CF835017; Name=CF835017; organism=Citrus sinensis; type=EST; length=677bp
AAAAATGCCCAACCCCAAAGATGTTCTTCGACATGACCGTCGGCGGTCAG
CCGGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAAC
CGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGT
CCGGCAAGCCTCTCCACTACGAAGGCTCGTCCTTCCACCGTGTGATCCCC
GGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGG
CGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGC
ACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAAC
GGATCTCAGTTCTTCGTCTGTACGGCCAGGACCGAGTGGCTCGATGGGAA
GCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCA
TCGAGAAAGTGGGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGTGATC
GCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCCGTC
ATCACGAGCCGTCTGATCGCGATCGTGATGATGATTATGTTATCTATTAT
TATGTGGGCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTGCTA
TGTTACTTGTTCGGGTCGGATCGGGTC
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