CF835017

Overview
NameCF835017
Unique NameCF835017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Homology
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.640e-16
Identity = 57/136 (41.91%), Postives = 70/136 (51.47%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKV 461
            G I +ELF+D  P+T  NF  L        K+G   +Y    FHR I  FM Q            ESI+   F DE     KH   G+LSMAN G  TNGSQFF+  A    LDG H VFG+VV G+DV+  +E +
Sbjct:  295 GNINVELFSDKKPKTCHNFIELA-------KTG---YYNDVIFHRNIKKFMIQGGDPTGTGKGG-ESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVGGLDVLSKLESI 419          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.142e-16
Identity = 63/174 (36.21%), Postives = 78/174 (44.83%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVC----------------------------TARTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +L  DV P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE   +     G LSMANAGP TNGSQFF+                             T  T WLD KH VFGQ++EG D ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLLPDVAPKTVENFVTHA-------KNG---YYNGVTFHRVINDFMVQGGDPTATGMGG-ESIYGEPFEDEFSKEAFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLIEGKDTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16
Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 3
Query:   21 MFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSM 326
            ++ D+ +   P GR++ EL+ D  PRT  NF+ LCTG  G  + G  LHY+ S FHRV+     Q            ESIYG  F DENF   H   G+L M
Sbjct:  146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16
Identity = 59/153 (38.56%), Postives = 77/153 (50.33%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK-PVVIAD 506
            G I +EL  D  P    NF  L           K  +Y  + FHR I  FM Q            +SI+G  F DE F    KH   GI+SMAN G  TNGSQFF+     + LD KH +FG+VV G++V+ A+EKV ++S    K P+ + D
Sbjct:  285 GEINIELHTDYAPHAVYNFVQLA----------KQGYYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDE-FCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLED 425          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 57/153 (37.25%), Postives = 77/153 (50.33%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALC-TGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVIAD 506
            G + +EL+ +  P+   NF  L  TG           +Y+G +FHR IP FM Q            +S++G  F DE +    H G G LSMAN G  TN SQFF     T  LD KH VFG+VVE ++V+  +E V +  S R    ++I D
Sbjct:  332 GDLTIELYPEFAPKAVWNFIKLSQTG-----------YYKGVAFHRNIPNFMIQGGDPSGSGRGG-QSVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVVENINVLSKMENVPTDGSNRPLNKILIKD 472          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAAM (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0954 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
The following BLAST results are available for this feature:
BLAST of CF835017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPIL2_RHIOR1.640e-1641.91Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]
PPI1_STAS12.142e-1636.21Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL6_MOUSE2.797e-1640.20Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
PPIL2_SCHPO2.797e-1638.56Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL2_GIBZE2.368e-1537.25Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
PPI1_STAAW2.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS2.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR2.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN2.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAM2.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835017 ID=CF835017; Name=CF835017; organism=Citrus sinensis; type=EST; length=677bp
AAAAATGCCCAACCCCAAAGATGTTCTTCGACATGACCGTCGGCGGTCAG
CCGGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAAC
CGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGT
CCGGCAAGCCTCTCCACTACGAAGGCTCGTCCTTCCACCGTGTGATCCCC
GGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGG
CGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGC
ACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAAC
GGATCTCAGTTCTTCGTCTGTACGGCCAGGACCGAGTGGCTCGATGGGAA
GCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCA
TCGAGAAAGTGGGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGTGATC
GCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCCGTC
ATCACGAGCCGTCTGATCGCGATCGTGATGATGATTATGTTATCTATTAT
TATGTGGGCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTGCTA
TGTTACTTGTTCGGGTCGGATCGGGTC
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