CF835017

Overview
NameCF835017
Unique NameCF835017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAAC (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain COL) GN=SACOL0957 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            G +  +LF ++ P+T ENF           K+G   +Y+G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   +                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.039e-15
Identity = 59/151 (39.07%), Postives = 76/151 (50.33%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE---NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMD--VVKAIEKVGSSSGRTNKPV 494
            G + +EL     P+T  NF  LC       K GK   Y+ + FHR IPGFM Q             SI+ S F DE       KH   G+LSMAN G  TN SQFF+       LDGKH VFG++V+G     +  +E+V S  G T++P+
Sbjct:  302 GALNLELHCGKAPKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQG-TDRPL 440          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 52/145 (35.86%), Postives = 68/145 (46.90%), Query Frame = 3
Query:   24 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGV--GKSGKPLH---YEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAR--TEWLDGKHVVFGQVVEGMD 437
            +FD          +  EL+  V P+T  NF  L  G K V  GK    +H   Y  +  ++V P    Q             ++YG KF DENF  KH  P  L+MA  GP +N S+F + T     E LDGK VVFGQ+  G+D
Sbjct:   55 YFDPVSKSMKEADLTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIITTKADGNEELDGKSVVFGQITSGLD 197          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV 422
            AG I +EL++   P+   NF  LC             +Y+ + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAGP  NGSQFF    R + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14
Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV 422
            AG I +EL++   P+   NF  LC             +Y+ + FHRV+PGF+ Q            ES+YG+ F DE   + +    G+++MANAGP  NGSQFF    R + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.420e-14
Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV 422
            AG I +EL++   P+   NF  LC             +Y+ + FHRV+PGF+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    R + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV 422
            AG I +EL++  TP+   NF  LC             +Y+G+ FHR++P F+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    R + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
The following BLAST results are available for this feature:
BLAST of CF835017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPI1_STAAC2.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB2.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA82.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA32.368e-1533.33Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_USTMA4.039e-1539.07Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
CYPR_YEAST5.276e-1535.86Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]
SDC10_MOUSE1.535e-1437.90Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT2.005e-1437.10Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
SDC10_BOVIN3.420e-1437.90Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
SDC10_DANRE4.466e-1437.90Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835017 ID=CF835017; Name=CF835017; organism=Citrus sinensis; type=EST; length=677bp
AAAAATGCCCAACCCCAAAGATGTTCTTCGACATGACCGTCGGCGGTCAG
CCGGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAAC
CGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGT
CCGGCAAGCCTCTCCACTACGAAGGCTCGTCCTTCCACCGTGTGATCCCC
GGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGG
CGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGC
ACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAAC
GGATCTCAGTTCTTCGTCTGTACGGCCAGGACCGAGTGGCTCGATGGGAA
GCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCA
TCGAGAAAGTGGGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGTGATC
GCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCCGTC
ATCACGAGCCGTCTGATCGCGATCGTGATGATGATTATGTTATCTATTAT
TATGTGGGCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTGCTA
TGTTACTTGTTCGGGTCGGATCGGGTC
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