CF835017

Overview
NameCF835017
Unique NameCF835017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 49/128 (38.28%), Postives = 64/128 (50.00%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMD 437
            G I +E+F D TPR AENF   C              Y    +HR I  FM Q            +SI+G  FADE     K    GI++ ANAGP TN SQFF+  A+   LDGK+ + G+V++G +
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAE 126          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV 422
            AG I +EL++   P+   NF  LC             +Y+ + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    R + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV 422
            AG I +EL++   P+   NF  LC             +Y+ + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    R + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQV 422
            AG I +EL++   P+   NF  LC             +Y+ + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    R + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 55/153 (35.95%), Postives = 72/153 (47.06%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMD-VVKAIEKVGS-SSGRTNKPVVIAD 506
            G + +EL  +  P+   NF  L   EKG        +Y   +FHR I  FM Q             SI+G  F DE      H+  GI+SMAN G  TN SQFF+       LD KH +F +V+EG D  + A+E V +  S R    +VI D
Sbjct:  339 GPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQDTTLTAMENVATDGSDRPLNKIVIKD 480          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 57/172 (33.14%), Postives = 73/172 (42.44%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVC---------------------------TARTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 491
            G + + LF D  P+T  NF        G+ K G   +Y+G  FHR+IP FM Q            +SIYG  F DE   + +   G LSMANAGP TNGSQFF+                               T  LD +H VFGQ+V+           G  +G  +KP
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVETGAQDKP 457          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.895e-13
Identity = 48/148 (32.43%), Postives = 71/148 (47.97%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 494
            AG I +EL++   P+   NF  LC             +Y+ + FHRV+P F+ Q            ES++G  F DE   + +    G+++MANAGP  NGSQFF    R + L+ KH +FG+V  G  +   +       G   +PV
Sbjct:   21 AGEIDIELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTIYNILRLAEVDIGEDERPV 156          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 48/143 (33.57%), Postives = 68/143 (47.55%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVK-------KHTGPGILSMANAGPGTNGSQFFVCTART-EWLDGKHVVFGQVVEGMDVVKAIEK 458
            G +V++L+ +  PR   NF  LC          K  +Y     H V   F+ Q            ESI+G  + D+ +F +       KH   G +SM N G   +GSQF + T    ++LDG H VFG+V EGMD+VK I +
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKINE 141          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL4_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 47/143 (32.87%), Postives = 68/143 (47.55%), Query Frame = 3
Query:   57 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVK-------KHTGPGILSMANAGPGTNGSQFFVCTART-EWLDGKHVVFGQVVEGMDVVKAIEK 458
            G +V++L+ +  PR   NF  LC          K  +Y     H V   F+ Q            ESI+G  + D+ +F +       KH   G +SM N G   +GSQF + T    ++LDG H VFG+V EGMD++K I +
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIIKKINE 141          
BLAST of CF835017 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 47/126 (37.30%), Postives = 61/126 (48.41%), Query Frame = 3
Query:   54 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYEGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTARTEWLDGKHVVFGQVVE 428
            +G I +EL  +  P+   NF  L   +KG        +Y+  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 422          
The following BLAST results are available for this feature:
BLAST of CF835017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPIL3_USTMA5.833e-1438.28Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
SDC10_PONAB1.299e-1337.10Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA1.299e-1337.10Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN1.299e-1337.10Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
PPIL2_NEUCR2.216e-1335.95Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
BPPI_STRP62.216e-1333.14Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
SDC10_XENLA2.895e-1332.43Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIL4_MOUSE1.588e-1133.57Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
PPIL4_HUMAN2.075e-1132.87Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo... [more]
PPIL2_ASPOR6.036e-1137.30Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835017 ID=CF835017; Name=CF835017; organism=Citrus sinensis; type=EST; length=677bp
AAAAATGCCCAACCCCAAAGATGTTCTTCGACATGACCGTCGGCGGTCAG
CCGGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAAC
CGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGT
CCGGCAAGCCTCTCCACTACGAAGGCTCGTCCTTCCACCGTGTGATCCCC
GGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGG
CGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGC
ACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAAC
GGATCTCAGTTCTTCGTCTGTACGGCCAGGACCGAGTGGCTCGATGGGAA
GCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCA
TCGAGAAAGTGGGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGTGATC
GCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCCGTC
ATCACGAGCCGTCTGATCGCGATCGTGATGATGATTATGTTATCTATTAT
TATGTGGGCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTGCTA
TGTTACTTGTTCGGGTCGGATCGGGTC
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