CF835024

Overview
NameCF835024
Unique NameCF835024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20
Identity = 59/144 (40.97%), Postives = 82/144 (56.94%), Query Frame = -2
Query:  262 EFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAWAADITSRPAWAKVLALLKH*TLCPLP 690
            ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW   I +RPA+ K +A +      PLP
Sbjct:   78 KYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAI------PLP 215          
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20
Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = -2
Query:  286 KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPM-FGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 651
            K  A + VW EVE+ Q+ P  + + ++ + +PM FG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:   90 KESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = -2
Query:  295 WKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 627
            W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:   98 WLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = -2
Query:  289 VWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 630
            VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:  100 VWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = -2
Query:  292 EFPDKGTQL---TCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 690
            ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:   77 KYADQGTDLLGKTLEGRAIVDQ--WVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 49/110 (44.55%), Postives = 63/110 (57.27%), Query Frame = -2
Query:  301 VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 630
            VW EVEA Q  PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:   99 VWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = -2
Query:  301 IAPLLVWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 645
            +A + VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   97 LAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CF835024 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = -2
Query:  301 IAPLLVWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 645
            +A + VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   97 LAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
The following BLAST results are available for this feature:
BLAST of CF835024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTF3_MAIZE2.554e-2040.97Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF2_ORYSJ7.431e-2043.09Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF3_ARATH9.705e-2046.02Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_ORYSJ1.268e-1943.48Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF7_ARATH2.024e-1737.96Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF4_MAIZE2.024e-1744.55Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT2.474e-1538.66Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT5.511e-1537.82Glutathione S-transferase 2 OS=Triticum aestivum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835024 ID=CF835024; Name=CF835024; organism=Citrus sinensis; type=EST; length=691bp
TTTTTTTTTTTTTTTTAGCAGAATATCTCCAGCTTCGTTTTATTCCGGTT
AATAGATAAAATAAAAACCTCAAGCCATCAACATCCCATTTGAATATGAG
GCAGTGCTGTTGAAATACAAAAGCGGTAGTACAAACTACAAAGCATCAAT
ATTCTGCAGAATATTGATGACAAACGCCAAACAAGAGAATACGAACTCGA
AAACCAGCCTAATAGGTATTACAAAAGATAAGTGACCACCGAGGAGCGAC
TAACGTCTAGTAGGTAGCGGGCAGAGTGTTCAGTGTTTGAGCAAGGCAAG
GACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATGCGCTAA
CATGGGGGCGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAACAACAAA
TTAATATTGGGGAGATGATGCAAATCGACCAAGGTGAAGCTGTCGCACGC
CAAGTATTTGGACTGAGACAAACGGGCCTCGTAAACATCTAAAATTTTGG
CAAGCTTAGCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTCATTCCA
AACATTGGCTTGTACACGAGCTCCCAGTTGAGCTTCGATGATGGGGGGTC
GAACTGGAGTGCCTCCACCTCCTTCCATACCAATAACGGGGCGATGGGCT
TGCCTGGGCATGTTAACTGGGTGCCTTTGTCTGGAAACTCC
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