CF835041

Overview
NameCF835041
Unique NameCF835041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30
Identity = 74/137 (54.01%), Postives = 87/137 (63.50%), Query Frame = -3
Query:  264 GEKGIG-NSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXG---ESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV---VIADCGQL 653
            G+KGI   SGKPL YK S FHRVI  FMCQ           G   ESIYG KF DENF   H  P +LSM N+GP TNGSQFF+ T  T  LDGKHVVFG+V+EG  +V+ +E+  S  G  ++PV    IADCG+L
Sbjct:   42 GDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLER--SEKGANDRPVEDWKIADCGEL 176          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30
Identity = 71/133 (53.38%), Postives = 84/133 (63.16%), Query Frame = -3
Query:  264 APGEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 659
            A GEKG G       YK S FHRVI  FM Q           G+SIYG +F DENF  KH GPG +SM NAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E   + S  +  K V+I D G++
Sbjct:   80 ATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVIIVDSGKI 205          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.942e-30
Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = -3
Query:  264 GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADCGQL 629
            G+   YKGS+FHRVI  FM Q           G SIYG +F DENF  +H G G LSM NAGP TNGSQFF+ T KT WLDGKHVVFG+VVEGM++V+ IE +   S  R  K + IA CG +
Sbjct:   76 GRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCGHI 198          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.313e-30
Identity = 68/130 (52.31%), Postives = 80/130 (61.54%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       +K S FHRV+P F+CQ           G+SIYG KF DENF  KHTGPG+LSM N G  TN SQFF+   K E LD KHVVFG V +GMD V+ IE  GS  G  ++ + I +CGQL
Sbjct: 2931 GEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRICITECGQL 3053          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.650e-30
Identity = 71/132 (53.79%), Postives = 85/132 (64.39%), Query Frame = -3
Query:  264 GEKGIGN-SGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADCGQL 653
            GEKGIG  S  PLHYKGS FHR+I GFMCQ           GESIYG+ F DE+F +KH   G+LSM N GP T  SQFF+ T  T  LDGKHVVFG+VV G +VV+ +E +      R    V+IA+CG+L
Sbjct:   42 GEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGEL 173          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.638e-30
Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = -3
Query:  264 GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 629
            G+   YKGS+FHRVI  FM Q           G SIYG +F DENF  KH G G LSM NAGP TNG+QFF+ T +  WLDGKHVVFG+VVEGM VV+ IE + + S  R  K V IA+CG +
Sbjct:   76 GRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCGHI 198          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.259e-29
Identity = 71/133 (53.38%), Postives = 83/133 (62.41%), Query Frame = -3
Query:  264 APGEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQL 659
            A GEKG G       Y+GS+FHRVI  FM Q           G+SIYG+KF DENF  +HT  G+LSM NAG  TNGSQFF+ TA T WLDGKHVVFG+V+EG D+V  I+ V      R  K V I  CG+L
Sbjct:   71 ATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQDRPTKDVKIVKCGEL 196          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29
Identity = 68/130 (52.31%), Postives = 78/130 (60.00%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       +K S FHRVIP F+CQ           G+SIYG KF DENF  KHTGPG+LSM N G  TN SQF +   K E LD KHVVFG V +GMD VK IE  GS  G   + + I +CGQ+
Sbjct: 3102 GEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVCRRITITECGQI 3224          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29
Identity = 68/122 (55.74%), Postives = 80/122 (65.57%), Query Frame = -3
Query:  264 GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 629
            G PL Y+GS FHRVI GFMCQ           GESIYG KF DENF +KH  P +LSM NAGP TNGSQ F+  A T  LDGKHVVFG+V++G  VV+AIE+  +++ R    V I  CG L
Sbjct:   53 GVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVIQGKRVVRAIERQETAADRPLADVRIDACGIL 174          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.147e-29
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = -3
Query:  264 GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGS-KFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 629
            G+P  YKGS FHRVI  FM Q             +IYG+ KF+DENF  +H  PG+LSM N+GP TNG QFF+ T  T +L+GKHVVFGQV++GMD+V+ IE   ++  + N+ VVI  CG++
Sbjct:   61 GRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRTTRDKPNQDVVIIQCGEM 183          
The following BLAST results are available for this feature:
BLAST of CF835041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
PPID_CANAL1.487e-3054.01Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
PPIB_MOUSE1.487e-3053.38Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_SCHMA1.942e-3055.28Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
RBP2_MOUSE3.313e-3052.31E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
CYP11_RHIOR5.650e-3053.79Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIB_SCHJA9.638e-3055.28Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_ARTBE1.259e-2953.38Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
RBP2_HUMAN1.644e-2952.31E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPID_ASHGO1.644e-2955.74Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
PPIH_EMENI2.147e-2950.41Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835041 ID=CF835041; Name=CF835041; organism=Citrus sinensis; type=EST; length=670bp
TTTTTTTTTTTTTTTTTACAAGACACAGCCCTATCTTATTTAAAACCGTG
TTAGCTCATAGAAAGACATAAAAAACAGGTTCATCAAGAACCACCACCCG
GAGACCCCGATCCAACCCGAACAAGTAACATAGCAGGGAAAATTAGATAA
AGATTAAAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCA
CCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATG
ATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTG
GTCCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCAT
TCCTTCGACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGG
TCTTGGCCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCA
TTCCCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTC
ATCGGCGAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGG
CGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAG
GACGAGCCCTTGTAGTGGAGTGGCTTGCCGGAATTGCCGATGCCTTTCTC
GCCCGGTGCAGAGGGCGCGG
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