CF835041

Overview
NameCF835041
Unique NameCF835041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.061e-44
Identity = 88/131 (67.18%), Postives = 96/131 (73.28%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG G       YKGS+FHRVIP FMCQ           G+SIYGS+F DENF  KH GPG+LSM NAGP TNGSQFF+CT KT+WLDGKHVVFG V EGMDVVK IE  GS SGRT+K +VI DCGQLS
Sbjct:   84 GEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQLS 207          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.061e-44
Identity = 85/130 (65.38%), Postives = 100/130 (76.92%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:   42 GEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164          
The following BLAST results are available for this feature:
BLAST of CF835041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
PPIA_PANPA4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE4.761e-4566.15Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIF_HUMAN1.061e-4467.18Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_PIG1.061e-4465.38Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06J06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835041 ID=CF835041; Name=CF835041; organism=Citrus sinensis; type=EST; length=670bp
TTTTTTTTTTTTTTTTTACAAGACACAGCCCTATCTTATTTAAAACCGTG
TTAGCTCATAGAAAGACATAAAAAACAGGTTCATCAAGAACCACCACCCG
GAGACCCCGATCCAACCCGAACAAGTAACATAGCAGGGAAAATTAGATAA
AGATTAAAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCA
CCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATG
ATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTG
GTCCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCAT
TCCTTCGACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGG
TCTTGGCCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCA
TTCCCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTC
ATCGGCGAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGG
CGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAG
GACGAGCCCTTGTAGTGGAGTGGCTTGCCGGAATTGCCGATGCCTTTCTC
GCCCGGTGCAGAGGGCGCGG
back to top