CF835041

Overview
NameCF835041
Unique NameCF835041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37
Identity = 72/128 (56.25%), Postives = 91/128 (71.09%), Query Frame = -3
Query:  267 EKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQ 650
            EKG G       +KGSSFHR+IP FMCQ           G+SIYG KF DENF+ KHTGPG+LSM N+GP TNGSQFF+   KT+WLDGKHVVFG++ +G+DV++ IE  GS  G+  + V+I+DCG+
Sbjct:  179 EKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQGSKDGKPKQKVIISDCGE 299          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 78/130 (60.00%), Postives = 88/130 (67.69%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKG SFHRVIP FM Q           G+SIYG+KF DENF  KHTGPG LSM NAGP TNGSQFF+ T K  WLDGKHVVFG+V EGMDVV+ IE +GS +G     ++I +CGQL
Sbjct:   42 GEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNGTPRAKIIIDNCGQL 164          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.063e-36
Identity = 79/131 (60.31%), Postives = 89/131 (67.94%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQL 653
            GEKG G       YKGS+FHRVI  FM Q           G+S+YG  F DENF   H GPG+LSM NAGP TNGSQFF+CT KT WLDG+HVVFGQV+EGM+VVK IE+  +  G R  K VVIADCGQL
Sbjct:  131 GEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.276e-36
Identity = 73/130 (56.15%), Postives = 89/130 (68.46%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GE+G G       Y    FHRVIP FMCQ           G+SIYG KF DENF  +H G G+LSM N+GP TNGSQFF+CT K +WLDGKHVVFG+VV+G +VVK +E VGS SG+  +PV+I+ CG+L
Sbjct:  150 GERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGEL 272          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.175e-35
Identity = 76/128 (59.38%), Postives = 85/128 (66.41%), Query Frame = -3
Query:  270 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 653
            GEKG G       Y GS+FHRVIP FM Q           G+SIYG KF DENF  KH  PG+LSM NAGP TNGSQFF+ T  T WLDGKHVVFG+V EGMDVVK +E +GS+SG T   +VI  CG
Sbjct:   40 GEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.619e-35
Identity = 72/130 (55.38%), Postives = 88/130 (67.69%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            G++G G       Y    FHRVIP FMCQ           G+SIYG KF DENF  +H G G+LSM N+GP TNGSQFF+CT K +WLDGKHVVFG+VV+G +VVK +E VGS SG+  +PV I+ CG+L
Sbjct:   56 GDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVTISRCGEL 178          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.619e-35
Identity = 76/131 (58.02%), Postives = 90/131 (68.70%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG G SGKPL Y+GS FHR+I  FM Q           GESIYG KF DENFV KH  P +LSM NAGPGTNGSQFF+ T  T  LDGKHVVFG+V++G  VV+A+E + + S R  +  VIA CG+L+
Sbjct:   42 GEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDRPVEDAVIAKCGELA 172          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.619e-35
Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G  GKPLH+KGS FHRVI  FM Q           GESIYG KF DENF  KH  P +LSM N+GPGTNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + + + +    V IA+CG+L+
Sbjct:   45 GEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTTDVTIAECGELT 175          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.619e-35
Identity = 72/131 (54.96%), Postives = 88/131 (67.18%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G  GKPLH+KGS FHRVI  FM Q           GESIYG KF DENF  KH  P +LSM N+GPGTNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ +E + + + +  K V I +CG+L+
Sbjct:   44 GEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGELT 174          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.619e-35
Identity = 75/130 (57.69%), Postives = 88/130 (67.69%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G       YKG  FHR+IP FM Q           G+SIYGSKFADENFVKKH   G+LSM NAGP TNGSQFF+ T    WLDGKHVVFG+V +GMD+VKAIE  G++SG+    +VI + G+L
Sbjct:   60 GEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTASGKPRAEIVIEEAGEL 182          
The following BLAST results are available for this feature:
BLAST of CF835041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
PPIE_BOVIN4.772e-3756.25Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIA1_RHIOR8.140e-3760.00Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
CP20B_ARATH1.063e-3660.31Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIE_SCHMA5.276e-3656.15Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
CYPH_SCHPO1.175e-3559.38Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPIE_SCHJA2.619e-3555.38Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
PPID_RHIOR2.619e-3558.02Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_EMENI2.619e-3555.73Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPID_ASPOR2.619e-3554.96Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
CYPC_YEAST2.619e-3557.69Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835041 ID=CF835041; Name=CF835041; organism=Citrus sinensis; type=EST; length=670bp
TTTTTTTTTTTTTTTTTACAAGACACAGCCCTATCTTATTTAAAACCGTG
TTAGCTCATAGAAAGACATAAAAAACAGGTTCATCAAGAACCACCACCCG
GAGACCCCGATCCAACCCGAACAAGTAACATAGCAGGGAAAATTAGATAA
AGATTAAAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCA
CCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATG
ATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTG
GTCCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCAT
TCCTTCGACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGG
TCTTGGCCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCA
TTCCCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTC
ATCGGCGAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGG
CGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAG
GACGAGCCCTTGTAGTGGAGTGGCTTGCCGGAATTGCCGATGCCTTTCTC
GCCCGGTGCAGAGGGCGCGG
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