CF835073

Overview
NameCF835073
Unique NameCF835073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDI_RICCO (Protein disulfide-isomerase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21
Identity = 61/199 (30.65%), Postives = 106/199 (53.27%), Query Frame = -3
Query:   81 IADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPK--LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQLKERDQ 671
            + D + ++     FGL+E +  ++    N    +  L+++L P +I  +      G +  Y KS+PIP+  N  V++VV  T  D+V NS K+VLLE Y PWC  C+  +  ++++A  +K   ++VIAK+DA+AN+ P     V  YPT+ F  A  K    +     +  +I +FI+   K +D++ + E    +D+
Sbjct:  306 LGDVEASQGAFQYFGLKEDQVPLIIIQTNDG--QKYLKANLEPDHIAPWVKAYKEGKVQAYRKSEPIPEVNNEPVKVVVADTLQDIVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYKSDADIVIAKLDATANDIPSDTFDVRGYPTVYFRSASGKVE--QYDGDRTKDDIISFIE---KNRDKAAQQESANGKDE 497          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDI_DROME (Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21
Identity = 60/216 (27.78%), Postives = 114/216 (52.78%), Query Frame = -3
Query:   63 RERFMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFD-NKAISKFLLESD-LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQLKERDQAPKDEL 701
            R+  +F  +   +ED  + F   FG+ + +   +      + ++K+  ESD L+   IE F  + L G L  +L SQ +P++ + N V+++V   F+ + L+  K VL+E Y PWC  C+  +   ++LA+ +K  +++VIAK+D++ANE   +++  +PT+ ++   D    I  +   +  +   F+    +  D  P +E  +E +   KDEL
Sbjct:  283 RDDILFVTISSDEEDHTRIF-EFFGMNKEEVPTIRLIKLEEDMAKYKPESDDLSAETIEAFLKKFLDGKLKQHLLSQELPEDWDKNPVKVLVSSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDSTANELESIKISSFPTIKYFRKEDN-KVIDFNLDRTLDDFVKFLDANGEVADSEPVEETEEEEEAPKKDEL 496          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDI2_CAEEL (Protein disulfide-isomerase 2 OS=Caenorhabditis elegans GN=pdi-2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 60/213 (28.17%), Postives = 120/213 (56.34%), Query Frame = -3
Query:   69 RFMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFD-NKAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIK-EQLKEKDQSPKDEQLKERDQAPKD 695
            + +F  ++   E+ A+  +  FGL++ +   +      + ++KF  +  ++T  NI +F    L G++ P+L S+ IP++ + N V+I+VGK F+ +  ++ K+VL+E Y PWC  C+  +   +KL + F   +++VIAK+D++ NE   ++++ +PT+ F+PAG      KV   +  + I  F K  +   K+ +   E+ K  ++A ++
Sbjct:  281 KVLFVYINTDVEENAR-IMEFFGLKKDELPAIRLISLEEDMTKFKPDFEEITTENISKFTQNYLDGSVKPHLMSEDIPEDWDKNPVKILVGKNFEQVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVKIQSFPTIKFFPAGSN----KVVDYTGDRTIEGFTKFLETNGKEGAGASEEEKAEEEADEE 488          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 56/214 (26.17%), Postives = 119/214 (55.61%), Query Frame = -3
Query:   66 RFMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFD-NKAISKFLLESD-LTPSNIEEFCSRLLHGTLTPYLKS-QPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQLKERDQAPKDE 695
            + +F  +D +D    +  L  FGL++ +   V     ++ ++K+  E++ LT   + +FC   L G + P+L S +P+P++ +   V+++VGK ++++  +  K+V +E Y PWC  C+  +   ++L + +K  +N+VIAK++++ANE   ++V  +PTL F+PA  +   I  +   +      F++   ++   +  D+ L+E  ++  +E
Sbjct:  285 KILFVFID-SDHTDNQRILEFFGLKKEECPAVRLITLDEELTKYKPETEELTAEKLTQFCHHFLEGKIKPHLMSNEPLPEDWDKQPVKVLVGKNYEEVAFDEKKNVFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANEVEAIKVHSFPTLKFFPASAERTVIDYNGERTLDGYKKFLESGGQDGYGNNDDDDLEEALESDMEE 497          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20
Identity = 61/223 (27.35%), Postives = 113/223 (50.67%), Query Frame = -3
Query:   63 RERFMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKF--LLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFI-------KEQLKEKDQSPKDEQLKERDQAPKDEL 701
            R + +F  VD+A ++  +  L  FGL+      +   + +   K+  +    +T ++I  FC  +L+G + PYL SQ IP + +   V+ +VGK F+ +  +  K+V ++ Y PWC  C+  +   E LA+ ++  ++++IA++DA+ANE     V  +PTL ++PAG     I+  +    +  + F+        E+  E+  +P  E         K+EL
Sbjct:  305 RGQVLFVVVDVAADN--EHVLQYFGLKAEAAPTLRLVNLETTKKYAPVDGGPVTAASITAFCHAVLNGQVKPYLLSQEIPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELDATANELDAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLETFSKFLDNGGVLPTEEPPEEPAAPFPEPPANSTMGSKEEL 525          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 61/207 (29.47%), Postives = 111/207 (53.62%), Query Frame = -3
Query:   90 RERFMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKF--LLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQLKE 701
            R + +F  VD+A ++  +  L  FGL+      +   + +   K+  +    +T ++I  FC  +L+G + PYL SQ +P + +   V+ +VGK F+ +  +  K+V ++ Y PWC  C+  +   E LA+ ++  ++++IA++DA+ANE     V  +PTL ++PAG      KV    S++++  F K  L      P +E L+E
Sbjct:  305 RGQVLFVVVDVAADN--EHVLQYFGLKAEAAPTLRLVNLETTKKYAPVDGGPVTTASITAFCHAVLNGQVKPYLLSQEVPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDVIIAELDATANELDAFAVHGFPTLKYFPAGPGR---KVIEYKSTRDLGTFSK-FLDNGGVLPTEEPLEE 505          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 53/174 (30.46%), Postives = 95/174 (54.60%), Query Frame = -3
Query:  123 FGLEESK--NTVVTAFDNK-AISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPK-LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 632
            +G+E  K    V+ + D K  + KF L++        +F ++   G LTP++KS+P+P + ++ V+ +V   FD++V N  KDV++  +  WC  C+    + E+ A   K   NLV+A +DA+AN+ P   QV  +PT+ F P G K++P+       + +I  ++  +  E+
Sbjct:  302 YGIEADKLPAVVIQSKDKKYKLEKFSLDA------FSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATANDVPSPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYLAREATEE 469          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19
Identity = 65/209 (31.10%), Postives = 106/209 (50.72%), Query Frame = -3
Query:   63 IADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHP-KLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQLKERDQAP----KDEL 671
            I D + ++      GL+E +  ++   D+   SK  L+  +    I  +      G LTP+ KS+PIP+  N  V++VV     D+V  S K+VL+E Y PWC  C+  +  +++ A   +  +++VIAKIDA+AN+ P +  V+ YPTL F  P+G K   +      ++  I  +IK+  +   Q+      K  + A     KDEL
Sbjct:  312 IGDIEASQGAFQYNGLKEDQAPLILIQDSD--SKKFLKEQVEAGQIVAWLKDYFDGKLTPFRKSEPIPEANNEPVKVVVADNIHDVVFKSAKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKIDATANDVPGEFDVQGYPTLYFVTPSGKK---VSYEGGRTADEIVDYIKKNKETAGQAAAAATEKAAEPAATEPLKDEL 515          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 68/229 (29.69%), Postives = 114/229 (49.78%), Query Frame = -3
Query:   63 RERFMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHF-KGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE---------------QLKEKDQSPKDEQLKERDQAPKDEL 701
            +E+F   A+    EDL       +GL +       AFD  +  K +LES    S +++F    L G  +P +KSQ I +N +++V  +VGK  D++V +  KDVL+  Y PWC  C+  +   ++LA  +     +++IAK+D + N+   + +E YPT++ YP G K+  +      S  ++  FIKE               Q K  +++  D +L + + A  DEL
Sbjct:  308 KEQFPLFAIHDMTEDLK------YGLPQLSEE---AFDELS-DKIVLESKAIESLVKDF----LKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDVDGKALYEEAQEKAAEEADADAELADEEDAIHDEL 522          
BLAST of CF835073 vs. ExPASy Swiss-Prot
Match: PDI_MAIZE (Protein disulfide-isomerase OS=Zea mays GN=PDI PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 56/179 (31.28%), Postives = 91/179 (50.84%), Query Frame = -3
Query:  138 IADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVRCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHP-KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 671
            I D + ++     FGL+E +  ++   D    SK  L+  +    I  +      G LTP+  S+PIP+  N  V++VV     D V  S K+VL+E Y PWC  C+  +  +++ A   +  + +VIAK+DA+AN+ P +  V+ YPTL F     K       +  ++ +I  FIK+
Sbjct:  308 IGDIEASQGAFQYFGLKEDQTPLILIQDGD--SKKFLKVHVEADQIVAWLKEYFDGKLTPFRNSEPIPEVNNEPVKVVVADNVHDFVFKSGKNVLIEFYAPWCGHCKKLAPILDEAATTLQSDEEVVIAKMDATANDVPSEFDVQGYPTLYFVTPSGKVT--SYDSGRTADDIVDFIKK 482          
The following BLAST results are available for this feature:
BLAST of CF835073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
PDI_RICCO3.120e-2130.65Protein disulfide-isomerase OS=Ricinus communis PE... [more]
PDI_DROME4.075e-2127.78Protein disulfide-isomerase OS=Drosophila melanoga... [more]
PDI2_CAEEL5.322e-2128.17Protein disulfide-isomerase 2 OS=Caenorhabditis el... [more]
GSBP_CHICK5.322e-2126.17Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDIA2_HUMAN2.022e-2027.35Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
PDIA2_PONAB4.506e-2029.47Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
ERP60_SCHMA1.311e-1930.46Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDI_WHEAT1.712e-1931.10Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_YEAST2.920e-1929.69Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
PDI_MAIZE2.472e-1831.28Protein disulfide-isomerase OS=Zea mays GN=PDI PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835073 ID=CF835073; Name=CF835073; organism=Citrus sinensis; type=EST; length=706bp
TTTTTTTTTTTTTTTCCTTTTTCTGTTAAAGTTTCAATATTCCACCCCTT
TTATAAGATCTATAATTCATCTTTGGGAGCTTGATCCCTTTCTTTCAATT
GTTCATCTTTTGGGGATTGATCTTTTTCTTTCAATTGTTCCTTGATAAAT
GCTGCTATGTTCTTTGAGCTGGACCTTGCTGAAACTTTGATCGGATTTGC
TTTATCACCAGCTGGGTAGAATAAAAGTGTTGGGTACTCTTCAACCTGCA
GTTTTGGATGCTCATTTGCAGAAGCATCTATCTTTGCAATGACTAGATTG
TCCAAACCCTTGAAGTGCTTAGCCAGCTTTTCGATTTGCTTGCTAGTTGT
CTCACATCTGACACACCATGGTGTATATACCTCTAGAAGAACATCCTTGT
GACTGTTCAAAACCAAGTCGTCAAATGTCTTTCCCACAACAATCTGCACG
TTTGCGTTTGTGTTATCTGGTATTGGCTGTGATTTCAAGTAAGGCGTCAG
AGTACCATGCAAAAGCCTTGAGCAAAACTCTTCTATGTTGCTTGGCGTGA
GATCTGACTCCAACAAAAACTTTGAAATGGCTTTGTTATCAAAGGCAGTC
ACCACAGTGTTCTTTGATTCTTCAAGCCCAAATAAAGTTAAAAATGGCTT
CGCCAGGTCTTCATCTGCGATATCTACTGCTGTAAACATGAATCTTTCCC
TTGAAA
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