CF835078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.479e-24 Identity = 45/110 (40.91%), Postives = 74/110 (67.27%), Query Frame = -3 Query: 145 DGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 474 +G+V+ H+ + K+ A + +L+++ FTA+WC PCRFI+P+F +A K+T VVF K+D+DE + VA + + ++PTF F+K G +D+VVGA K + K+ +H G Sbjct: 4 EGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGG 113
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.479e-24 Identity = 47/108 (43.52%), Postives = 75/108 (69.44%), Query Frame = -3 Query: 148 GQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 471 G+V+ H+ ++ KL AA + +L+++ FTA WC PCRFI+P+F LA K+ VVF KVD+DE VA +++ ++PTF ++K +++DKVVGA K +E K+ +H+ Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHS 118
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 9.767e-24 Identity = 49/111 (44.14%), Postives = 78/111 (70.27%), Query Frame = -3 Query: 145 DGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 474 +GQV+G H+ + +L+ A + +L+++ FTA+WC PCR I+P+F +LA K+ + +F KVD+DE + VA + + ++PTF FIK G+ VDK+VGA+K L+ KI +H G Sbjct: 5 EGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTG 115
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.847e-23 Identity = 49/111 (44.14%), Postives = 76/111 (68.47%), Query Frame = -3 Query: 145 DGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 474 +GQV+G H + +L+ A ++ +L+++ FTA+WC PCR I+P+F +LA K+ + +F KVD+DE ++VA + + ++PTF IK+G VDKVVGA K L IA+H G Sbjct: 5 EGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKHTG 115
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.410e-22 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = -3 Query: 148 DGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 474 + QV+ H+ E+ K A + +L+++ FTA+WCGPCR I+P + LA K+ V F KVD+D+ +DVA + + ++P+F +K G+EV+++VGA K L KIA HA Sbjct: 4 EAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVHA 112
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.842e-22 Identity = 46/108 (42.59%), Postives = 72/108 (66.67%), Query Frame = -3 Query: 151 DGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 474 +G+V+ H+ ++ KL AA + +L+++ FTATWC PCRFI+P+F +LA K+ VVF KVD+DE VA + + ++PTF F+K G+ + VVGA K + + +H Sbjct: 4 EGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.142e-22 Identity = 44/104 (42.31%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 160 GQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 471 G V I + ++ KL A R ++V+ F+ATWCGPC+ ++P F L+ K++ ++FL VD+DE D ++ W+I + PTFFF+KNG+++ K+VGA+K L++K+ Sbjct: 23 GNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.474e-21 Identity = 47/121 (38.84%), Postives = 75/121 (61.98%), Query Frame = -3 Query: 160 QRKQAGADREALSGLRDGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 522 +R D E L G V I + ++ KL+ A+R ++V+ F+A WCGPC+ I+P + L+ Y ++FL +D+DE D + W I + PTFFF+++G++VDK+VGA+K L +KI Sbjct: 7 KRNHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.320e-20 Identity = 44/86 (51.16%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 151 ALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 408 A RL+I+ F A WCGPCR ISP+F +++Y FLKV+ D ARD+ R+NI ++PTF F+KN ++VD V GA++ A+ KI QH Sbjct: 21 ANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQH 106
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_CHICK (Thioredoxin OS=Gallus gallus GN=TXN PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 46/102 (45.10%), Postives = 70/102 (68.63%), Query Frame = -3 Query: 160 VMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 465 V + + ++FE +L AA +LV++ F+ATWCGPC+ I P F +L K+ VVF+++D+D+A+DVAT ++ +PTF F KNGK+V + GA+K LE I Sbjct: 2 VKSVGNLADFEAELKAAGE--KLVVVDFSATWCGPCKMIKPFFHSLCDKFGDVVFIEIDVDDAQDVATHCDVKCMPTFQFYKNGKKVQEFSGANKEKLEETI 101 The following BLAST results are available for this feature:
BLAST of CF835078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835078 ID=CF835078; Name=CF835078; organism=Citrus sinensis; type=EST; length=566bpback to top |