CF835078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRX1_SCHPO (Thioredoxin-1 OS=Schizosaccharomyces pombe GN=trx1 PE=2 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15 Identity = 32/81 (39.51%), Postives = 57/81 (70.37%), Query Frame = -3 Query: 160 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 402 +LV++ F ATWCGPC+ I+P F ++ Y+ F+KVD+D+ ++A + ++P+FF KNG++++++VGA+ + LE I Sbjct: 19 KLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASI 99
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO5_DICDI (Putative thioredoxin-5 OS=Dictyostelium discoideum GN=trxE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.848e-15 Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = -3 Query: 160 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNL--ASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 444 SE+E +L A A ++Y TATWCGPCR I+P+FTN+ A + +K+ F KVD+D + + ++ VPTF +NG+E ++ GA+K ALE + Sbjct: 9 SEYEAELKNAPVA----VVYLTATWCGPCRAIAPVFTNISNAPENSKITFFKVDVDALKKLPVCESLQGVPTFIAYRNGEEQERFSGANKVALENMV 101
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TXND2_MOUSE (Thioredoxin domain-containing protein 2 OS=Mus musculus GN=Txndc2 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.113e-14 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 154 LRDGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 480 L +G V I EFE L A +LV + F+A WCGPCR + PLF +L+ K+ V+FL+VD ++ + I +PTF F KN ++V + GA LER I++ Sbjct: 407 LEEGLVRVIKDKEEFEEVLKDAGE--KLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTEDCEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 513
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.113e-14 Identity = 38/99 (38.38%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 169 VMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALE 465 V I S +E++ K+ AT V++ F ATWCGPC+ I+P L+ +T + F KVD+DE +VA + ++PTF F K G+ ++V GA+ +A++ Sbjct: 3 VTPIKSVAEYKEKVTDATGP---VVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGANPAAIQ 98
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXL4_ARATH (Thioredoxin-like 4 OS=Arabidopsis thaliana GN=At1g11530 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14 Identity = 35/103 (33.98%), Postives = 64/103 (62.14%), Query Frame = -3 Query: 160 QVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 468 +V+ I SA + ++ A ++ +FTA WC P F++ F LA Y +FL VD+DE ++VA++ + ++PTF F+K+G +DK+VGA+ +++++ Sbjct: 3 RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRV 105
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_GEOCY (Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14 Identity = 36/85 (42.35%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 151 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEV-DKVVGADKSALERKIAQH 402 +LV++ FTA+WCGPC+ I+P + +A ++ V+F KVD+DE + A I ++PTF F K+GK + D V GA+++ L KI ++ Sbjct: 21 KLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYKSGKALSDYVQGANEAGLREKIKKN 105
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.016e-14 Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = -3 Query: 160 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 456 I S +EF+ K+ A V++ ATWCGPC+ I+P A YT F ++D+DE +VA I ++PTF K+G++V VVGA+ ALE I Sbjct: 10 ITSKAEFQEKV---LNAKGFVVVDCFATWCGPCKAIAPTVEKFAQTYTDASFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANPGALEAGI 105
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_CHLCV (Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.163e-14 Identity = 37/88 (42.05%), Postives = 58/88 (65.91%), Query Frame = -3 Query: 148 ALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALERKIAQHA 408 A LV++ F A WCGPC+ ++P+ +L ++ + V+ KV+ID+ A ++ + S+PT K+GKEVD+VVG DK +L R I QH+ Sbjct: 15 ATGLVLIDFFAEWCGPCKMLTPVLESLEAEVSSVLIGKVNIDDHPAPAEQYGVSSIPTLILFKDGKEVDRVVGLKDKDSLIRLINQHS 102
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRX3_YEAST (Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae GN=TRX3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.197e-13 Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = -3 Query: 160 TKLNAATRALRLV------ILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 432 TKL T L+ ++ F ATWCGPC+ + P T L Y V F+K D+DE+ D+A + ++PTF K+G+ + K++GA+ +ALE+ I Sbjct: 28 TKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGI 124
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_CHLTR (Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.041e-13 Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = -3 Query: 151 LVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALERKIAQH 399 LV++ F A WCGPC+ ++P+ LA++ V LKVDID + A ++++ S+PT K+GKEV++ VG DK +L + I++H Sbjct: 18 LVLIDFFAEWCGPCKMLTPVLEALAAELPHVTILKVDIDSSPRPAEQYSVSSIPTLILFKDGKEVERSVGLKDKDSLIKLISKH 101 The following BLAST results are available for this feature:
BLAST of CF835078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835078 ID=CF835078; Name=CF835078; organism=Citrus sinensis; type=EST; length=566bpback to top |