CF835078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_CHLLT (Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA PE=1 SV=5) HSP 1 Score: 74.7146 bits (182), Expect = 3.482e-13 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = -3 Query: 145 FETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQHAG 438 F+T++ + +A V++ F A+WCGPC + P+ LA Y K + K+++DE ++A ++ I S+PT IK GK VD++VGA K+ + +KI +H G Sbjct: 12 FQTEILDSDKA---VLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKIDEHIG 108
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO1_DROYA (Thioredoxin-1 OS=Drosophila yakuba GN=dhd PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 35/102 (34.31%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 154 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 456 + + ++F ++ AA +L++L F A WCGPC+ + +LA KY TK V LK+D+D+ ++ R+ + S+PTF F++N + + GAD+ L +A+ Sbjct: 4 VRTMTDFHKRIEAADD--KLIVLDFYANWCGPCKDMESTVKSLARKYSTKAVVLKIDVDKFEELTERYKVRSMPTFVFLRNNRRLAAFSGADEHKLTNMMAK 103
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13 Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = -3 Query: 151 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQH 396 V++ F A WCGPCR I+P+ LA +Y K+ K++ DE+ + AT++ I S+PT F KNG+ D V+GA K+ L K+ ++ Sbjct: 88 VLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKY 171
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TXND2_RAT (Thioredoxin domain-containing protein 2 OS=Rattus norvegicus GN=Txndc2 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 7.757e-13 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = -3 Query: 154 LRDGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 480 L +G V I EFE L A +LV + F+A WCGPCR + P F +L+ K+ V+FL+VD ++ + + +PTF F KN ++V + GA LE+ IA+ Sbjct: 442 LEEGMVRVIKDKEEFEEVLKDAGE--KLVAVDFSAPWCGPCRKMRPHFHSLSLKHEDVIFLEVDTEDCEQLVQDCEVFHLPTFQFYKNEEKVGEFSGALVEKLEKSIAE 548
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 7.757e-13 Identity = 35/84 (41.67%), Postives = 55/84 (65.48%), Query Frame = -3 Query: 151 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQH 396 V++ F A WCGPC+ I+P+ LA +Y+ K+ K++ DEA +AT++NI S+PT F KNG+ + ++GA KS L I ++ Sbjct: 95 VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 178
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_CHLPN (Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.323e-12 Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = -3 Query: 148 LVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALERKIAQHA 399 LV++ F A WCGPCR ++P+ NLA++ V K++IDE A + + S+PT K+G EV +VVG DK L I +HA Sbjct: 18 LVLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINIDENSKPAETYEVSSIPTLILFKDGNEVARVVGLKDKEFLTNLINKHA 102
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_CHLMU (Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.323e-12 Identity = 34/84 (40.48%), Postives = 55/84 (65.48%), Query Frame = -3 Query: 151 LVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALERKIAQH 399 LV++ F A WCGPC+ ++P+ LA++ V LK+DID + A ++ + S+PT K+GKEV++ VG DK +L + I++H Sbjct: 18 LVLVDFFAEWCGPCKMLTPVLEALAAELPYVTILKLDIDASPRPAEQFGVSSIPTLILFKDGKEVERSVGLKDKDSLVKLISKH 101
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO1_DROME (Thioredoxin-1 OS=Drosophila melanogaster GN=dhd PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.728e-12 Identity = 33/102 (32.35%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 154 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 456 + + +++ ++ AA +L++L F ATWCGPC+ + +LA KY+ K V LK+D+D+ ++ R+ + S+PTF F++ + + GAD+ L +A+ Sbjct: 4 VRTMNDYHKRIEAADD--KLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKVRSMPTFVFLRQNRRLASFAGADEHKLTNMMAK 103
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: TRX2_SCHPO (Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe GN=trx2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12 Identity = 30/106 (28.30%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 151 QVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 468 +V + S ++ T+++A ++ ++ F A WCGPC+++ P L+ + K F+ V+ D+ D+A + + ++PT + G+E+D++VGAD L +A++ Sbjct: 18 KVNAVESFGDYNTRISAD----KVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAKY 119
BLAST of CF835078 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 190 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG 444 S+F++K+ + + ++ F ATWCGPC+ I+P+ LA Y K LK+D+DE A ++ + S+PT K+G+ VDKVVG Sbjct: 9 SDFDSKIESGVK-----LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVG 89 The following BLAST results are available for this feature:
BLAST of CF835078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835078 ID=CF835078; Name=CF835078; organism=Citrus sinensis; type=EST; length=566bpback to top |