CF835079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: GRS17_ARATH (Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana GN=GRXS17 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.527e-11 Identity = 29/84 (34.52%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 423 V+L+F A+WC + + +F++LA+ + + F +V+ +E +++ +++ +VP F F K+GK VD + GAD S+L K+ + AG Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEISEAYSVAAVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAG 107
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 381 V++ F A WCGPCR I+P+ LA +Y K+ KV+ D++ ++AT + I S+PT KNG++ + V+GA Sbjct: 86 VLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGA 156
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 118 SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKI 408 S SE++TK+ + V++ F A WCGPCR I P+ LA + K F K++ DE+ + A R+ I SVPT K G++ D ++GA + LE+ I Sbjct: 92 SDSEWQTKVLESDVP---VLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTI 187
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11 Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 1 Query: 184 FTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG 378 F ATWCGPC+ I+P+ LA Y K LK+D+DE A ++ + S+PT K+G+ VDKVVG Sbjct: 24 FWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVG 89
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIOM_HUMAN (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.311e-11 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASK-YTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALE 399 V++ F A WCGPC+ + P + +K + KVV KVDID+ D+A + + +VPT +KNG VDK VG D+ LE Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLE 158
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIOM_BOVIN (Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASK-YTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALE 399 V++ F A WCGPC+ + P + +K + KVV KVDID+ D+A + + +VPT +KNG VDK VG D+ LE Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDDHTDLALEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLE 158
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO_MYCGE (Thioredoxin OS=Mycoplasma genitalium GN=trxA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 160 ALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG 378 A + VI+ F A WCGPC+ SP F A +++ F+KV++D+ D+A +NI S+PT +NG E + +G Sbjct: 17 AKKNVIVDFWAAWCGPCKLTSPEFQKAADEFSDAQFVKVNVDDHTDIAAAYNITSLPTIVVFENGVEKKRAIG 89
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO2_DICDI (Thioredoxin-2 (Fragment) OS=Dictyostelium discoideum GN=trxB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 112 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDK 369 IH +S E L+ +A RLVI F+A WCGPCR ISP+F L++++ F+ VDID+ I SVPTF+F +NG +V + Sbjct: 5 IHISSNEE--LDKHLQAERLVI-DFSAAWCGPCRAISPVFEKLSNEFVTFTFVHVDIDKLSGHPIVKEIRSVPTFYFYRNGAKVSE 87
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQHAG 423 V++ F A WCGPCR I+P+ LA Y K+ KV+ D++ +VA+ + I S+PT K G++ + V+GA KS L I ++ G Sbjct: 80 VLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYIG 165
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO_TREPA (Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11 Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 169 LVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALERKIAQHA 420 LVI+ F A WCG C+ + P+ + S+ + VV K+++D+ +D+A +N+ S+PT K+GKEVD+ +G DKS + I ++A Sbjct: 20 LVIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTLIQKNA 105 The following BLAST results are available for this feature:
BLAST of CF835079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835079 ID=CF835079; Name=CF835079; organism=Citrus sinensis; type=EST; length=568bpback to top |