CF835079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.985e-12 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 124 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG 378 S+F++K+ + + ++ F ATWCGPC+ I+P+ LA Y K LK+D+DE A ++ + S+PT K+G+ VDKVVG Sbjct: 9 SDFDSKIESGVK-----LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVG 89
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO_CYACA (Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.985e-12 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 166 RLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQH 417 +LV++ F A WCGPCR ISP+ LA +Y +V +K++ DE ++ + I S+PT K+GK VD V+GA KS L + ++ Sbjct: 21 KLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKY 106
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: GLRX3_BOVIN (Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.899e-12 Identity = 34/106 (32.08%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 103 VMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 420 V+ + S+ +FE L RA L++++F A W C ++ + LA ++ +V F+K++ + +V+ ++ I SVPTF F KN +++D++ GA L +K+ +HA Sbjct: 12 VVEVGSSGQFEELLRL--RAKSLLVVHFWAPWAPQCAQMNDVMAELAKEHQQVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHA 115
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO_NEUCR (Thioredoxin OS=Neurospora crassa GN=trx PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12 Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 88 LRDGQVMGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTK---VVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVD-----KVVGADKSALERKIAQHAGQ 426 + DG V I+SA EF LN + V+ F A WCGPC+ I+P++ A ++ + F K+++D + VA + + ++PTF F KNGK+V + GAD ++L R A+ G+ Sbjct: 1 MSDG-VKHINSAQEFANLLNTT----QYVVADFYADWCGPCKAIAPMYAQFAKTFSIPNFLAFAKINVDSVQQVAQHYRVSAMPTFLFFKNGKQVAVNGSVMIQGADVNSL-RAAAEKMGR 115
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO2_CHLTE (Thioredoxin-2 OS=Chlorobium tepidum GN=trx2 PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 166 RLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQHAG 423 ++ ++ F A WCGPC + P+ LA Y K + K+++DE + A ++ I S+PT IK GK VD++VGA K+ + +K+ +H G Sbjct: 22 KVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNTAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKLDEHIG 109
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO3_DICDI (Thioredoxin-3 OS=Dictyostelium discoideum GN=trxC PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSAL 396 V++ F+A WCGPCR I+P+F L++++T F+ VDID+ I SVPTF+F NG +V + GA+++ L Sbjct: 22 VVVDFSAEWCGPCRAIAPVFDKLSNEFTTFTFVHVDIDKVNTHPIVKEIRSVPTFYFYVNGAKVSEFSGANEATL 96
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO1_DICDI (Thioredoxin-1 OS=Dictyostelium discoideum GN=trxA PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSAL 396 V++ F+A WCGPCR ISP+F L++++ FL VDID+ I SVPTF F +NG +V + GA +S L Sbjct: 23 VVVDFSAVWCGPCRAISPVFEKLSNEFITFTFLHVDIDKLNVHPIVSKIKSVPTFHFYRNGSKVSEFSGASESIL 97
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO1_ANASP (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12 Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQH 417 V++ F A WCGPCR ++P+ +A +Y K+ +KV+ DE VA+++ I S+PT K G++VD VVGA K+ L + + +H Sbjct: 23 VLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKH 106
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO1_ANASO (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12 Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 172 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQH 417 V++ F A WCGPCR ++P+ +A +Y K+ +KV+ DE VA+++ I S+PT K G++VD VVGA K+ L + + +H Sbjct: 23 VLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKH 106
BLAST of CF835079 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.686e-12 Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 124 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVG 378 ++F++K+ + + ++ F ATWCGPC+ I+P+ LA+ Y K LK+D+DE A ++ + S+PT K+G+ VDKVVG Sbjct: 9 ADFDSKVESGVQ-----LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89 The following BLAST results are available for this feature:
BLAST of CF835079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835079 ID=CF835079; Name=CF835079; organism=Citrus sinensis; type=EST; length=568bpback to top |