CF835105

Overview
NameCF835105
Unique NameCF835105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB8_MOUSE (DnaJ homolog subfamily B member 8 OS=Mus musculus GN=Dnajb8 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG++  AS  DI+ AY KLA++WHPD   KNP    EA+ +F+Q+ EAY VLSD  KRS+YD
Sbjct:    4 YYEVLGVQSSASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYD 66          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14
Identity = 51/126 (40.48%), Postives = 68/126 (53.97%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSF---EDLQRMFVEMVDGMSFDFNYDP 509
            YY +LG+++ AS  DI+ AY KLA+KWHPD   KNP    EA+ +F+Q+ EAY VLSD  KR +YD    + L               S  ++  + G +F   ED+ R F    D  SFDF  DP
Sbjct:    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGKEGLNGGGGG--------GSHFDSPFEFGFTFRNPEDVFREFFGGRDPFSFDFFEDP 118          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB8_HUMAN (DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD-AGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSF---EDLQRMFVEMVDGMSFDFNYDPTDAQR 524
            YY +LG++  AS  DI+ AY KLA++WHPD   KNP    EA+ +F+ + EAY VLSD  KRS+YD AG          D +       +  ++  D G +F   ED+ R F   +D  SF+F   P ++ R
Sbjct:    4 YYEVLGVQASASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC---------DSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFFGGLDPFSFEFWDSPFNSDR 123          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSF---EDLQRMFVEMVDGMSFDFNYDPTD 515
            YY +LG+++ AS  DI+ AY K A+KWHPD   KNP    EA+ +F+Q+ EAY VLSD  KR +YD       +   E   G      S  ++  + G +F   +D+ R F    D  SFDF  DP D
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD-------KYGKEGLNGGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFD 121          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFD 494
            YY ILG+ +DA+  +I+ AY +L  +WHPDR  +N     EA+ RF++IQEAY VLSD  KR+MYD              +G+V E  +      + G  F+D+ R F  + +   FD
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPEN---RKEAEQRFKEIQEAYEVLSDPQKRAMYDR-------------FGYVGEQPTYQET--ESGGFFDDIFREFENIFNRDIFD 107          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.142e-13
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFD 494
            YY ILG+ +DA+  +I+ AY +L  +WHPDR  +N     EA+ RF++IQEAY VLSD  KR+MYD              +G+V E  +      + G  F+D+ R F  + +   FD
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPEN---RKEAEQRFKEIQEAYEVLSDPQKRAMYDR-------------FGYVGEQPTYQET--ESGGFFDDIFRDFENIFNRDIFD 107          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.142e-13
Identity = 64/163 (39.26%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD----AGLYDPLEEED----EDFYGF--VQEMVSMMNNVKDEG-----DSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTS--RC 578
            YY ILG+ +DA+  DI+ +Y KLA+K+HPDR+ K PG    A+ +F++I EAY+VLSD  KR+ YD    AG+      ED     DF GF  + EM    +     G     D   DL   F E   G+  D +   T+    C N S G  A+ GTS  RC
Sbjct:    7 YYEILGLSRDATPEDIKKSYRKLALKYHPDRN-KEPG----AEEKFKEISEAYAVLSDPEKRAQYDRFGHAGINGQYTAEDIFRGADFSGFGDIFEMFFGGSRRGPRGPRRGSDLQYDLYITFEEAAFGVRKDIDVPRTE---RCSNCS-GTGARPGTSPKRC 160          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+++ AS  DI+ AY KLA+KWHPD   KNP    EA+ +F+Q+ EAY VLSD  KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+++ AS  DI+ AY KLA+KWHPD   KNP    EA+ +F+Q+ EAY VLSD  KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+++ AS  DI+ AY KLA+KWHPD   KNP    EA+ +F+Q+ EAY VLSD  KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
The following BLAST results are available for this feature:
BLAST of CF835105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
DNJB8_MOUSE6.694e-1454.55DnaJ homolog subfamily B member 8 OS=Mus musculus ... [more]
DNJB6_BOVIN6.694e-1440.48DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNJB8_HUMAN8.742e-1438.64DnaJ homolog subfamily B member 8 OS=Homo sapiens ... [more]
DNJB6_RAT8.742e-1439.84DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]
DNAJ_THESQ8.742e-1438.14Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEMA1.142e-1338.14Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_METTE1.142e-1339.26Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
DNJB6_PONAB1.491e-1354.55DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA1.491e-1354.55DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN1.491e-1354.55DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06K24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835105 ID=CF835105; Name=CF835105; organism=Citrus sinensis; type=EST; length=633bp
TCTAATGCTCCCTTATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGAT
back to top