CF835105

Overview
NameCF835105
Unique NameCF835105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEON (Chaperone protein dnaJ OS=Shewanella oneidensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ +DAS  +I+ AY +LAMK+HPDR   NPG    A+  F++++EAY +L+D NK++ YD
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDR---NPGDKA-AEASFKEVKEAYEILTDANKKAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSCS (Chaperone protein dnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 52/163 (31.90%), Postives = 77/163 (47.24%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD---------AGLYDPLEEED------EDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTS--RC 578
            YY +LG++++AS  +I+ A+ +LA ++HPD +      A +A+ +F++I EAY VLSD  KRSMYD         A  +DP    D      E F+G    M       +   D    L   F E + G+     Y   +   AC    +G  A+ GT   RC
Sbjct:    7 YYEVLGVQRNASQDEIKKAFRRLARQYHPDVNK-----APDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPTAAPGFDPFASADPFSSIFETFFG--GTMRGTQRGPQRGADLRYTLSISFEEAIFGVEKTIEYRRMETCPAC----RGSGAEPGTEPVRC 158          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_METS4 (Chaperone protein dnaJ OS=Methylobacterium sp. (strain 4-46) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKD 428
            YY +LG+ K A  ++++SA+ KLAM +HPDR   NPG   EA+ +F+++ EAY  LSD+ KR+ YD   +    +      GF  +    M+++ D
Sbjct:    6 YYEVLGVAKTAGEAELKSAFRKLAMAYHPDR---NPG-DKEAEIKFKEVNEAYQTLSDDQKRAAYDRFGHAAFSQGGPGGPGFGADFGDFMSDIFD 97          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_LARHH (Chaperone protein dnaJ OS=Laribacter hongkongensis (strain HLHK9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            +Y +LG+ +DAS  DI+ AY KLAMK+HPDR   NP  + +A+ +F++ +EAY +LSD  KR+ YD
Sbjct:    6 FYDVLGVNRDASDDDIKKAYRKLAMKYHPDR---NPD-SKDAEEKFKEAKEAYEILSDAQKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLI (Chaperone protein dnaJ OS=Escherichia coli (strain K12) GN=dnaJ PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A   +IR AY +LAMK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ECODH (Chaperone protein dnaJ OS=Escherichia coli (strain K12 / DH10B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A   +IR AY +LAMK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOBW (Chaperone protein dnaJ OS=Escherichia coli (strain K12 / BW2952) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG+ K A   +IR AY +LAMK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVV (Chaperone protein dnaJ OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ +DAS  DI+ AY KLA+++HPDR+  +P    EA+ +F++  EAY VL D  KR+ YD
Sbjct:    6 YYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDP----EAEQKFKEAAEAYDVLRDGEKRARYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVH (Chaperone protein dnaJ OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ +DAS  DI+ AY KLA+++HPDR+  +P    EA+ +F++  EAY VL D  KR+ YD
Sbjct:    6 YYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDP----EAEQKFKEAAEAYDVLRDGEKRARYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_BURXL (Chaperone protein dnaJ OS=Burkholderia xenovorans (strain LB400) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ K+AS  +I+ AY KLAMK HPDR   NPG   +A+  F++++EAY +LSD  KR+ YD
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKHHPDR---NPG-NKDAEGHFKEVKEAYEMLSDSQKRAAYD 67          
The following BLAST results are available for this feature:
BLAST of CF835105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
DNAJ_SHEON4.061e-1148.48Chaperone protein dnaJ OS=Shewanella oneidensis GN... [more]
DNAJ_ROSCS4.061e-1131.90Chaperone protein dnaJ OS=Roseiflexus castenholzii... [more]
DNAJ_METS44.061e-1137.50Chaperone protein dnaJ OS=Methylobacterium sp. (st... [more]
DNAJ_LARHH4.061e-1150.00Chaperone protein dnaJ OS=Laribacter hongkongensis... [more]
DNAJ_ECOLI4.061e-1150.00Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECODH4.061e-1150.00Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOBW4.061e-1150.00Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_DESVV4.061e-1148.48Chaperone protein dnaJ OS=Desulfovibrio vulgaris s... [more]
DNAJ_DESVH4.061e-1148.48Chaperone protein dnaJ OS=Desulfovibrio vulgaris (... [more]
DNAJ_BURXL4.061e-1151.52Chaperone protein dnaJ OS=Burkholderia xenovorans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06K24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835105 ID=CF835105; Name=CF835105; organism=Citrus sinensis; type=EST; length=633bp
TCTAATGCTCCCTTATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGAT
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