CF835105

Overview
NameCF835105
Unique NameCF835105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPB (Chaperone protein dnaJ OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDL 452
            YY  L + + A  S +++A+ KLAMKWHPDR   NPG A  ++ RF++I EAY VL D +KR+ YD   +   E+      GF     S  +      D FEDL
Sbjct:    8 YYETLEVDRSADDSSLKAAFRKLAMKWHPDR---NPGDA-SSESRFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGAGGPGFGAGFASSFS------DIFEDL 101          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ K+AS  +I+ AY KLAMK HPDR+  N     EA+ +F++++EAY +LSD  K++ YD
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNK----EAEEKFKEVKEAYEMLSDPEKKAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAE (Chaperone protein dnaJ OS=Pseudomonas aeruginosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            +Y +LG+ + AS +D++ AY +LAMK+HPDR   NPG   EA+ +F++  EAY VLSD +KR+ YD
Sbjct:    6 FYEVLGVERGASEADLKKAYRRLAMKYHPDR---NPG-DKEAEDKFKEANEAYEVLSDASKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAB (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            +Y +LG+ + AS +D++ AY +LAMK+HPDR   NPG   EA+ +F++  EAY VLSD +KR+ YD
Sbjct:    6 FYEVLGVERGASEADLKKAYRRLAMKYHPDR---NPG-DKEAEDKFKEANEAYEVLSDASKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA8 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            +Y +LG+ + AS +D++ AY +LAMK+HPDR   NPG   EA+ +F++  EAY VLSD +KR+ YD
Sbjct:    6 FYEVLGVERGASEADLKKAYRRLAMKYHPDR---NPG-DKEAEDKFKEANEAYEVLSDASKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA7 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain PA7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            +Y +LG+ + AS +D++ AY +LAMK+HPDR   NPG   EA+ +F++  EAY VLSD +KR+ YD
Sbjct:    6 FYEVLGVERGASEADLKKAYRRLAMKYHPDR---NPG-DKEAEDKFKEANEAYEVLSDASKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 30/66 (45.45%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ K AS  +I+ AY +LAMK+HPDR+  +     EA+ +F++++EAY +L+D+ KR+ YD
Sbjct:    6 YYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDK----EAESQFKEVKEAYEILTDDQKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_PASMU (Chaperone protein dnaJ OS=Pasteurella multocida GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ + A   +I+ AY KLAMK+HPDR+  N     E + +F++IQEAY VLSD+ KR+ YD
Sbjct:    6 YYDVLGVERGADEKEIKRAYKKLAMKYHPDRTQGNK----ELEEKFKEIQEAYEVLSDKQKRANYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_MARMS (Chaperone protein dnaJ OS=Marinomonas sp. (strain MWYL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ KDA   DI+ AY  LA K+HPD++  NP    EA  +F+++ EAY +LS ++KR+ YD
Sbjct:    6 YYDVLGVAKDADKKDIKKAYRSLANKYHPDKNPDNP----EALDKFKELAEAYEILSSDDKRAAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_IDILO (Chaperone protein dnaJ OS=Idiomarina loihiensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 31/75 (41.33%), Postives = 51/75 (68.00%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEE 365
            +Y +LG+ KDA+  DI+ AY ++AMK+HPDR+  +     + + +F++I++AY VLSD  KR MYD   ++  E+
Sbjct:    6 FYQVLGVSKDANERDIKKAYKRMAMKYHPDRTEGDK----DMEIKFKEIKQAYEVLSDPQKRQMYDQYGHEAFEQ 76          
The following BLAST results are available for this feature:
BLAST of CF835105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
DNAJ_RHOPB5.304e-1140.38Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_RALME5.304e-1148.48Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_PSEAE5.304e-1150.00Chaperone protein dnaJ OS=Pseudomonas aeruginosa G... [more]
DNAJ_PSEAB5.304e-1150.00Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA85.304e-1150.00Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA75.304e-1150.00Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PHOLL5.304e-1145.45Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]
DNAJ_PASMU5.304e-1150.00Chaperone protein dnaJ OS=Pasteurella multocida GN... [more]
DNAJ_MARMS5.304e-1146.97Chaperone protein dnaJ OS=Marinomonas sp. (strain ... [more]
DNAJ_IDILO5.304e-1141.33Chaperone protein dnaJ OS=Idiomarina loihiensis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06K24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835105 ID=CF835105; Name=CF835105; organism=Citrus sinensis; type=EST; length=633bp
TCTAATGCTCCCTTATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGAT
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