CF835105

Overview
NameCF835105
Unique NameCF835105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_HAES2 (Chaperone protein dnaJ OS=Haemophilus somnus (strain 2336) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG++K A   +I+ AY +LAMK+HPDR+  +     E++ +F++I EAY VL+D+ KR+MYD
Sbjct:    6 YYEILGVQKGADDKEIKRAYKRLAMKYHPDRTKGDK----ESEEKFKEINEAYEVLADKEKRAMYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_HAES1 (Chaperone protein dnaJ OS=Haemophilus somnus (strain 129Pt) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILG++K A   +I+ AY +LAMK+HPDR+  +     E++ +F++I EAY VL+D+ KR+MYD
Sbjct:    6 YYEILGVQKGADDKEIKRAYKRLAMKYHPDRTKGDK----ESEEKFKEINEAYEVLADKEKRAMYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_FUSNP (Chaperone protein dnaJ OS=Fusobacterium nucleatum subsp. polymorphum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAK-NPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYG 386
            YY +LG+ K+AS +DI+ AY K AMK+HPD+ A        +A+ +F++I EAY VLSD  K+  YD   +   E+    F G
Sbjct:    6 YYEVLGVDKNASENDIKKAYRKAAMKYHPDKFANATDAEKKDAEEKFKEINEAYQVLSDNEKKQQYDQFGHAAFEQGGAGFGG 88          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_FUSNN (Chaperone protein dnaJ OS=Fusobacterium nucleatum subsp. nucleatum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAK-NPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYG 386
            YY +LGI K AS +DI+ AY K AMK+HPD+ A  +     +A+ +F++I EAY +LSD  K+  YD   +   E+    F G
Sbjct:    6 YYEVLGIDKSASENDIKKAYRKAAMKYHPDKFANASDAEKKDAEEKFKEINEAYQILSDSQKKQQYDQFGHAAFEQGGAGFGG 88          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_DESDG (Chaperone protein dnaJ OS=Desulfovibrio desulfuricans (strain G20) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ +DA+  +I+ AY K AM++HPDR+  NP    EA+ +F++  EAY VL D  KR+ YD
Sbjct:    6 YYEVLGVSRDAADDEIKRAYRKKAMEFHPDRNPDNP----EAEAKFKEAAEAYDVLRDAEKRARYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_DEIPR (Chaperone protein dnaJ OS=Deinococcus proteolyticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY +LG+ + AS SDI+SAY KLA ++HPD++A +   A     +F++I EAY+VLSD  KR  YD
Sbjct:    6 YYEVLGVSRSASDSDIKSAYRKLAKQYHPDKNAGDESAAE----KFKEIGEAYAVLSDPQKRQAYD 67          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILGI K AS  DI+ AY K A+K+HPD++ K+P    +A+ +F+++ EAY VLSD  KR +YD
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKN-KSP----QAEEKFKEVAEAYEVLSDPKKREIYD 65          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILGI K AS  DI+ AY K A+K+HPD++ K+P    +A+ +F+++ EAY VLSD  KR +YD
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKN-KSP----QAEEKFKEVAEAYEVLSDPKKREIYD 65          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 338
            YY ILGI K AS  DI+ AY K A+++HPD++ K+P    +A+ RF+++ EAY VLSD  KR +YD
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALRFHPDKN-KSP----QAEERFKEVAEAYEVLSDPKKREIYD 65          
BLAST of CF835105 vs. ExPASy Swiss-Prot
Match: DNAJ_UREPA (Chaperone protein dnaJ OS=Ureaplasma parvum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 45/155 (29.03%), Postives = 74/155 (47.74%), Query Frame = 3
Query:  141 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD-------------------AGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRM---FVEMVDGMSFDFNYDPTDAQRACVNT 539
            YY ILG+ K A+  +I++A+ KLA + HPDR+             F++I EAY VLSD  KR+ YD                   +G +  ++ +  D +G      S  +N  ++ ++++   R+   F+E V+G+S + NYD       C  T
Sbjct:    6 YYEILGVSKSATPEEIKAAFRKLAKEHHPDRNKSADDTL------FKEINEAYEVLSDSKKRAQYDQFGHDGPQGFSSASGFSGFSGGFGGVDFDINDIFGSFFNNASSSHNSSNQYETYDIHLRLHLDFMEAVNGISKNINYDRKITCHKCQGT 154          
The following BLAST results are available for this feature:
BLAST of CF835105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
DNAJ_HAES26.927e-1148.48Chaperone protein dnaJ OS=Haemophilus somnus (stra... [more]
DNAJ_HAES16.927e-1148.48Chaperone protein dnaJ OS=Haemophilus somnus (stra... [more]
DNAJ_FUSNP6.927e-1142.17Chaperone protein dnaJ OS=Fusobacterium nucleatum ... [more]
DNAJ_FUSNN6.927e-1142.17Chaperone protein dnaJ OS=Fusobacterium nucleatum ... [more]
DNAJ_DESDG6.927e-1146.97Chaperone protein dnaJ OS=Desulfovibrio desulfuric... [more]
DNAJ_DEIPR6.927e-1150.00Chaperone protein dnaJ OS=Deinococcus proteolyticu... [more]
DNJB4_PONAB9.047e-1151.52DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN9.047e-1151.52DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_BOVIN9.047e-1151.52DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNAJ_UREPA9.047e-1129.03Chaperone protein dnaJ OS=Ureaplasma parvum GN=dna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06K24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835105 ID=CF835105; Name=CF835105; organism=Citrus sinensis; type=EST; length=633bp
TCTAATGCTCCCTTATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGAT
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